Roseiflexus castenholzii: Rcas_2017
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Entry
Rcas_2017 CDS
T00585
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_2017
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rcas_2017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
DUF7125
AAA_22
AAA
nSTAND3
KdpD
AAA_24
nSTAND_NTPase5
RecA_N
DZR
NTPase_1
NACHT
AAA_30
ABC_tran
ATPase_2
AAA_19
DUF7129
HypA
AAA_14
SLFN-g3_helicase
TackOD1
Motif
Other DBs
NCBI-ProteinID:
ABU58105
UniProt:
A7NKT5
LinkDB
All DBs
Position
2586585..2587979
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AA seq
464 aa
AA seq
DB search
MTKVRTVFVCQQCGSQQSRWMGRCPDCGTWDSLVEQTERRDAASRSRAITSGFQGRPVGL
RDVAIGGFTRLPVLGREFVGVLGGGLVPGSVVLIGGEPGIGKSSLLLQVAAHFADHVGPA
LYVSAEESVQQIKLRAARMGLEPERLLVYSETNLNAILDQVAAIKPQLVVVDSIQTVYLE
ELSSAAGSVSQVREGALRLLRVAKEHAIPMFLVGHVTKEGAIAGPRVLEHIVDVVLYLEG
DRFHQYRLLRGVKNRFGSTDEVGVFEMTAHGLREVPNPSQAFLSERTVNAPGSAVAVTME
GTRPILVEVQALTAHSAGAQPRRTANGFDMNRLLMLVAVLTKRVGLPLFNQDVYVNIVGG
LRIDEPAVDLAVAVAIASSFRNMRVRQDLAMVGEVGLAGELRSAGQLERRLTEASGLGFT
CALCPETAHLPCIEGLGVITARALADAIETALRDCDTGTHENQS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagtgcgtaccgtgttcgtttgccagcagtgtggctcgcagcagtcgcgctgg
atgggacgatgcccggattgcggcacatgggacagcctggttgagcagactgaacggcgc
gatgcggcttctcgcagtcgcgccatcacttccggtttccagggtcgtccggttgggttg
cgtgatgtcgctatcggcggttttacgcgcctgccagtgctgggacgcgagttcgtcggg
gtgctcggcggcggtctggtgcctgggagtgtggtgctgatcggcggcgaaccagggatt
ggcaagagcagcctgcttctgcaagttgccgctcattttgcagaccatgtcggtccagcg
ttgtatgtctcagcggaagagtctgttcagcagatcaaactgcgcgctgcgcgcatgggt
ctggaaccggaacgtctgctggtctactccgaaaccaatctgaatgccattctcgaccag
gttgcggcaatcaaaccgcagctcgtggtcgtcgactcaatccagacggtctacctggaa
gaattgagctctgctgcggggagcgtcagtcaggtgcgtgaaggggcgctacgcctgttg
cgcgttgccaaggaacacgccattccgatgttcctcgtcggtcatgtcacgaaagaaggg
gcgattgccggaccgcgtgtgctcgagcatatcgtcgatgtggtgctgtatctggaagga
gatcgctttcatcagtatcgcctgctgcgcggcgttaagaatcgctttggctcgaccgat
gaagtcggcgtttttgagatgacggcgcatggattgcgcgaagtgccgaatccttcgcag
gcgtttctctccgagcgtactgtcaatgcgcccggctcggcagtggcagtgacgatggag
gggacgcgccccatcctggttgaggtgcaggcattgacggcgcacagcgccggcgcgcaa
ccgcgccgcactgcgaacggcttcgatatgaaccggttgctgatgctggttgcggtgctg
accaaacgggtcggcttgccattgttcaatcaggatgtctatgttaacattgtcggcggt
ctgcgtatcgatgaaccagcagtcgatctggcggtcgcggttgcaattgcgtcatcattc
cgcaatatgcgtgtgcgccaggacctggccatggtcggtgaggtcggattggcaggggag
ttgcgcagcgccgggcagttggaacgacgccttaccgaagcgtcgggactgggctttacc
tgcgcgttgtgtccggaaactgcccatctgccgtgtatcgagggtcttggcgtgatcaca
gcgcgtgcgcttgccgatgcaattgaaacggcgttgcgtgattgtgataccggtactcat
gagaatcagtcttaa
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