Roseiflexus castenholzii: Rcas_2190
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Entry
Rcas_2190 CDS
T00585
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca00600
Sphingolipid metabolism
rca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Rcas_2190
Enzymes [BR:
rca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
Rcas_2190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
SepSecS
DUF6993
Motif
Other DBs
NCBI-ProteinID:
ABU58273
UniProt:
A7NLA0
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All DBs
Position
complement(2814450..2815874)
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AA seq
474 aa
AA seq
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MTISPVGRTPDEIMTLLHGFKAQDMDWRSGRVFAYIYQPAEIAATLVKEAYSLYLSENCL
DPTTFPSVAQLENDVVRMIAGLLQGDECVVGNMTSGGTESILLAVKTARDWARAHRPHVT
QPEMILARTAHAAFHKAGHYLGVKPVVVEFDPVTFEADVTAMRAAITDNTILLVASAPCY
SQGVIDPVPAIATLAQEYGALCHVDACVGGMYLPFLRTLGRTIPPFDFSVPGVTSISVDM
HKYGYAAKGASVVLYRDRSLRRHQIFASTETTAYTIINPTALSSRSAGPIAGAWAILNYL
GEAGYRDLVATVQAATERLMAGVDAIDGLYVLGRPAMSMFSFASQAINVFQLADALRRRG
WYLQPQFSTPRSPRNLHVSITYGVAHNVDALIADIAACVEEVRHMPPIDLALVRSVVEAL
TQDPSPAVVEGLMAAVGLQPGALPQEMALINEVLDTLPDAVANEVLIDFFNNLY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgactatttcgcctgtcggcagaacgccggacgagatcatgaccctcctccacggattc
aaggcgcaggatatggactggcgctccggtcgggtttttgcgtatatctatcagcccgct
gagatcgctgcgacgctggtcaaagaggcatactcattgtacctcagcgagaactgcctg
gacccgacgacctttccgagcgtggcacaactggagaatgacgttgtgcgcatgatcgcc
gggttgttgcagggcgacgagtgcgttgtcggcaatatgaccagtggcggcacggagagc
attctcctggcagtgaaaaccgcgcgcgattgggcgcgcgcacaccgaccacacgtgaca
cagccggagatgattctggcgcgcacggcgcacgctgcgtttcacaaggcaggtcactat
ctcggcgttaaaccggtcgtcgtcgagttcgatccggtgacgttcgaggcggatgtgacg
gcaatgcgcgcagccatcaccgacaacaccattctgctggttgcatcggcgccatgctac
tcgcaaggagtgatcgaccctgtgcccgcaatcgcaacactggcgcaggagtacggagcg
ctctgccacgtcgatgcatgcgtcggcgggatgtatctcccgttcctgcgcaccctcggg
cgaacgatcccgccattcgacttcagtgttcccggcgttacgtcgatctcagtagacatg
cacaagtacggctacgctgcaaagggggcatcggtcgtgctctaccgcgaccgtagcctg
cggcggcatcagatctttgcctcgaccgaaacgaccgcgtataccattatcaatcccacg
gcgctcagttcgcgttcagcaggaccaatcgcaggtgcgtgggcgatcctgaactacctg
ggagaagcaggctaccgcgatctggttgcgaccgtgcaggcggcaacggagcggttaatg
gcgggggttgatgcgattgatggtctgtatgtgttgggtcgtccggcaatgagtatgttt
tccttcgcatcgcaagcgatcaatgtctttcagctggctgatgctctgcgtcgccgtggt
tggtaccttcagccgcagttttcgacgccgcgctcaccgcgcaatctgcacgtttctatc
acgtatggcgtcgcgcataacgtcgatgcgttgatcgccgatattgccgcctgcgttgag
gaagttcggcatatgccgccgattgacctggcgctggtgcgttcggtggtcgaggcgctc
acgcaagacccttcgccagccgtagtcgaaggactgatggcagcggttgggttgcaaccg
ggtgcgttgccgcaggagatggcgctgatcaacgaggtgctcgacacactgccggatgca
gtggcgaatgaggtgttgatcgacttctttaacaacctgtattga
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