Roseiflexus castenholzii: Rcas_2345
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Entry
Rcas_2345 CDS
T00585
Name
(GenBank) TPR repeat-containing protein
Organism
rca
Roseiflexus castenholzii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
TPR_8
TPR_2
TPR_1
TPR_11
AAA_22
NACHT
TPR_10
nSTAND3
DctP
Motif
Other DBs
NCBI-ProteinID:
ABU58428
UniProt:
A7NLN2
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All DBs
Position
3025402..3031011
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AA seq
1869 aa
AA seq
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MPDFPEFPDSLKARLAAANVTDAAAVLAMLLDALPSISDMQQLRDLWHMAPAEEEDAFLA
AAEQRAAAAEASGDAARAAALRERINVLHAYRAEIAQKGEILRAALERLEAAASDDDLKA
LWGDVPLELEEPFLQLAEARAAELDQTGDAARAAALRERINVLHAYRAEIAQKGEILRAA
LERLEAAASDDDLKALWGDVPLELEEPFLQLAEARAAELDQTGDRTAAVRLRERVTMLRQ
AREAREIARSMVQQALERLEAAATDDEAWQVWLDLPVELEEWFLQNVADRAAELEQNNEP
QRAGRLRVAHARMQAERARRHEQNNHPVAQALQAFLQAPTDADATRVFNERRDLLQPFEA
QRAFDALAQQAPPDAQPLFEARAALLRSLRGAMPEPRPAPSPALRGEPALRAPESAGARI
YINAANAEGGGDAIVVNNIVIERRWTRPRPERLPIDTIERTCALDEVARLLTERGQLAIT
GGQRTASAAIQGMPGIGKTVLARQLALALDERYPGGVIWEEIGPEITAPEATQPILNRWA
RYALSVPPHLDDRIAFDAGAVRALFAAQGQPLLVILDNVWSLEGIRWLRSALPDNAHLVI
TTRLETVMVGLGGGEYVLGLLTPDEARALIALRLGWNDLPPEHHAWADALAQGVDHHALA
LDIAIRRLRLDARSPGTARWREQIERLLGHIRSGNGFERLALPDGERNQSVEAVLAYSYA
QMDDAARARFRALGAFAPEASFGVDAAAALWQCDCDAAEDGLSALANAALLEPGDGDRRW
RQHTLLRGYALALLRRDGEHEAAAARHAAFYADAMRAADDAQRFYELLGDYPNLRHAFAW
AIENDLDLAQNLINNSANLQRSHGYGRDGLEWAEQALARAVRRGTPAHVARAQGSLGNAL
QHAATLAGEDRAARLRAALAAYDEALRFSTPATAPLDYAMTQTNRGTVLQDLATLAGEDR
AARLRAALAAYDEALRFSTPATAPLDYARTQTNRGTVLQALATLAGEDRAARLRAALAAY
DEALRFSTPATAPLDYARTQTNRGTVLQALATLAGEDRAARLRAALAAYDEALRFRTPAT
APLDYARTQTNRGTVLQALATLAGEDRAARLRAALAAYDEALRFRTPATAPLDYAMTQTN
RGTVLQALATLAGEDRAARLRAALAAYDEALRFSTPATAPLDYARTQTNRGTVLQALATL
AGEDRAARLRAALAAYDEALRFSTPATAPLDYAMTQTNRGTVLQDLATLAGEDRAARLRA
ALAAYDEALRFSTPATAPLDYARTQTNRGTVLQALATLAGEDRAARLRAALAAYDEALRF
STPATAPLDYAMTQTNRGNVLQALATLAGEDRAARLRAALAAYDEALRFSTPATAPLDYA
MTQTNRGTVLQALATLAGEDRAARLRAALAAYDEALRFSTPATAPLDYARTQTNRGNVLQ
ALATLAGEDRAARLRAALAAYDEALRFRTPATAPLDYARTQTNRGNVLQDLATLAGEDRA
ARLRAALAAYDEALRFSTPATAPLDYAMTQGNLLILYQTLANEPGEERATRLLEALRAGW
TAFHMFTALQHAEFQQRAIRQLRALRAACGADFDALWSSLDAGPPPAWLSAPDEPDLPQP
LVDLLERLAAAGVTDEAGLLAALEADPQLRAALWAPLVQRLLAVSSGEELLDFWRALPAA
LEEPLAAAAEEFARQAEQAGDAALAQALRERAEGLRAIRAIADQQANPMRQAIQQAWQRY
VELVQAAEAAGHDIAAWQAAVAAGEALLAPEFAATPGIDWSAVRQMVSSACNTLGNALHD
AGRAAEALAAYDRAIALQPEEAMWRCNRVGALIDLGRHDEAAEELARARALEPDAARLAE
LEARLRDQP
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgccagatttcccagagtttcccgacagcctcaaagcccgcctcgccgctgccaacgtc
accgacgccgctgctgtcctggcaatgctgctcgatgcgctgccgtcgatttccgatatg
cagcaactccgcgacctgtggcacatggcgccggcggaggaagaagacgccttcctcgcc
gctgccgaacagcgcgccgctgccgccgaagcctctggcgacgcggcgcgcgccgcagcc
ctgcgcgaacgcatcaacgtgctgcacgcctatcgcgccgagattgcgcagaagggcgaa
atcctgcgcgcggcgctcgaacgcctggaggctgctgcgtccgatgatgacctgaaggcg
ctctggggcgatgtgccgctcgaattggaagaacccttcctgcaactcgccgaagcgcgc
gccgctgaactcgatcaaaccggcgacgcggcgcgcgccgcagccctgcgcgaacgcatc
aacgtgctgcacgcctatcgcgccgagattgcgcagaagggcgaaatcctgcgcgcggcg
ctcgaacgcctggaggctgccgcgtccgatgatgacctgaaggcgctctggggcgatgtg
ccgctcgaattggaagaacccttcctgcaactcgccgaagcgcgcgccgctgaactcgat
caaactggcgaccgcacagccgccgtgcgcctgcgcgagcgagtaacgatgctacgccag
gcgcgcgaagcgcgtgagattgccagaagcatggttcagcaggcgctcgaacgcctggag
gctgccgcaaccgacgacgaagcctggcaggtctggctcgatctgccggttgaactcgag
gagtggttccttcagaacgttgctgaccgcgccgctgaactcgaacagaacaacgagccg
caacgcgccggacggctgcgcgttgcgcatgcccgtatgcaggcggaacgcgcccgccgt
cacgaacagaacaatcaccctgtcgcccaggcattacaggcattccttcaagctccgacc
gacgccgacgccacgcgggtgttcaatgagcgccgcgatctgttgcagcccttcgaggcg
cagcgcgcgttcgacgccctggcgcagcaggcgccgccggatgcgcagccgttgttcgag
gcgcgcgcggcattgctgcgctccctgcgcggcgccatgcctgagccgcgccctgcaccg
tctcccgcgctgcgcggcgaacccgcgttgcgcgcgccggagtcggcaggcgcgcgcatc
tatatcaacgcggcgaacgctgaaggcggcggcgatgcaatcgtcgtgaacaacatcgtc
attgaacggcgctggacccgcccgcgcccggagcgcctgccgatcgacactatcgaacgc
acctgcgccctggatgaagtcgcgcgtctcctcaccgagcgtggtcaactggcgatcacc
ggcgggcagcgcacggcgtcggctgccatccagggcatgcccggcatcggcaaaaccgtc
ctggcgcgccaactggcgctggcgctcgacgaacgctaccccggcggcgtgatctgggag
gagatcggaccggagatcaccgcgccggaagcgacgcagcccatcctgaaccgctgggcg
cgctatgcgctgagcgtgccgccgcacctcgacgaccgcatcgctttcgacgccggcgcg
gtgcgcgcgctgttcgctgcgcaggggcagccgctcctcgtcatcctcgacaatgtctgg
tcgctggagggcattcgctggttgcgcagcgcgctgccggacaacgcccatctcgtgatc
accacccgcctggagacggtgatggtcgggctgggaggcggcgaatatgtgctggggctg
ctgacgccagacgaagcgcgcgcgctgattgcgctacggctgggatggaacgacctgccg
cctgagcatcatgcatgggcggatgcgctggcgcagggagtcgaccaccatgccctggcg
ctggacatcgccatccgtcgcctgcgcctcgacgctcgttcgcccggaacggcgcgctgg
cgcgagcagatagaacggctgctggggcacatacgcagcggaaatgggttcgagcgcctg
gcgctgccggacggcgagcgcaaccagagcgtcgaagccgtgctcgcctacagttacgcg
cagatggacgacgcggcgcgcgcgcgcttccgtgcgctcggcgccttcgcgccggaagcg
tcgttcggcgttgacgcggcggcagcgctctggcagtgcgattgcgacgcggcggaggac
gggctgagcgcactggcgaacgctgcgctgctggaaccgggcgatggcgacaggcgctgg
cgccagcatacactgctgcgcggctacgctctggcgttgttgcggcgcgacggcgaacac
gaggccgccgcagcgcgccatgccgcattctacgccgacgccatgcgcgccgccgacgat
gcgcagcgcttctatgaactgctcggcgactatccgaacctgcggcacgccttcgcctgg
gcgattgagaacgatctggacctggcgcagaacctgatcaataacagcgccaaccttcag
cggtcgcacgggtatgggcgcgatggactggagtgggcggaacaggcgctggcgcgcgcc
gtccgtcgcggcacgccggcgcatgtcgcgcgcgcgcagggatcgctgggcaacgccctg
caacacgccgcgacgctggcgggggaagaccgcgccgcgcggctgcgcgcagcgctcgcc
gcctacgacgaggcgctgcgcttctctacccccgccacggcgccgctcgactacgctatg
acgcagaccaaccgggggactgtgttgcaggacctggcgacgctggcgggggaagaccgc
gccgcgcggctgcgcgcagcgctcgccgcctacgacgaggcgctgcgcttctctaccccc
gccacggcgccgctcgactacgctaggacgcagaccaaccgggggactgtgttgcaggcc
ctggcgacgctggcgggggaagaccgcgccgcgcggctgcgcgcagcgctcgccgcctac
gacgaggcgctgcgcttctctacccccgccacggcgccgctcgactacgctaggacgcag
accaaccgggggactgtgttgcaggccctggcgacgctggcgggggaagaccgcgccgcg
cggctgcgcgcagcgctcgccgcctacgacgaggcgctgcgcttcagaacccccgccacg
gcgccgctcgactacgctaggacgcagaccaaccgggggactgtgttgcaggccctggcg
acgctggcgggggaagaccgcgccgcgcggctgcgcgcagcgctcgccgcctacgacgag
gcgctgcgcttcagaacccccgccacggcgccgctcgactacgctatgacgcagaccaac
cgggggactgtgttgcaggccctggcgacgctggcgggggaagaccgcgccgcgcggctg
cgcgcagcgctcgccgcctacgacgaggcgctgcgcttctctacccccgccacggcgccg
ctcgactacgctaggacgcagaccaaccgggggactgtgttgcaggccctggcgacgctg
gcgggggaagaccgcgccgcgcggctgcgcgcagcgctcgccgcctacgacgaggcgctg
cgcttctctacccccgccacggcgccgctcgactacgctatgacgcagaccaaccggggg
actgtgttgcaggacctggcgacgctggcgggggaagaccgcgccgcgcggctgcgcgca
gcgctcgccgcctacgacgaggcgctgcgcttctctacccccgccacggcgccgctcgac
tacgctaggacgcagaccaaccgggggactgtgttgcaggccctggcgacgctggcgggg
gaagaccgcgccgcgcggctgcgcgcagcgctcgccgcctacgacgaggcgctgcgcttc
tctacccccgccacggcgccgctcgactacgctatgacgcagaccaaccgggggaatgtg
ttgcaggccctggcgacgctggcgggggaagaccgcgccgcgcggctgcgcgcagcgctc
gccgcctacgacgaggcgctgcgcttctctacccccgccacggcgccgctcgactacgct
atgacgcagaccaaccgggggactgtgttgcaggccctggcgacgctggcgggggaagac
cgcgccgcgcggctgcgcgcagcgctcgccgcctacgacgaggcgctgcgcttctctacc
cccgccacggcgccgctcgactacgctaggacgcagaccaaccgggggaatgtgttgcag
gccctggcgacgctggcgggggaagaccgcgccgcgcggctgcgcgcagcgctcgccgcc
tacgacgaggcgctgcgcttcagaacccccgccacggcgccgctcgactacgctaggacg
cagaccaaccgggggaatgtgttgcaggacctggcgacgctggcgggggaagaccgcgcc
gcacggctgcgcgcagcgctcgccgcctacgacgaggcgctgcgcttctctacccccgcc
acggcgccgctcgactacgctatgacgcagggtaatttgctgatcctctatcaaaccctg
gcgaatgagccgggggaggagcgcgcgacccgcctgctggaagcgctgcgcgccggctgg
acggcgttccacatgtttacggcattacagcacgctgaatttcagcaacgggcgatacgc
cagcttcgtgctctccgcgctgcctgcggcgctgacttcgacgcgctgtggtcgtcgctg
gacgcgggtccgccgccggcgtggctgagcgctcccgatgaaccggacctcccgcaacct
ctggtcgatctgctggagcgcctggctgccgctggcgtaaccgacgaggccggtctcctg
gctgcgctggaggctgacccacagttgcgcgcagcgctgtgggcgccgctggtgcaacgc
ttgctggcggtgtcgtctggcgaggagttgctggacttctggcgcgcattgcccgccgca
ctggaagaaccgctggctgccgccgccgaggaattcgcgcggcaggcggaacaggcgggc
gatgcggcgctggcgcaggcgctgcgcgagcgggctgaagggctgcgcgcgattcgcgcc
attgccgaccagcaggcaaacccaatgcgccaggctatccagcaggcgtggcagcgttat
gtcgaacttgtccaggcggcggaagcggccgggcatgatattgccgcgtggcaggcggcg
gtggcggccggcgaggcgctgctcgcgccggagttcgccgccacgccggggattgactgg
agcgctgtgcgccagatggtttcgtccgcctgtaatactctcggcaacgcgctccacgac
gccggtcgcgccgcagaagcgctcgccgcctacgatcgcgccattgcgctgcaaccggag
gaagcgatgtggcggtgcaatcgcgtcggtgcgctgatcgacctggggcggcacgacgag
gcggcggaagaactcgcccgcgcccgcgcgctcgaaccggacgccgcgcgcctggcggaa
ctcgaagcgcggctgagagatcagccgtga
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