Roseiflexus castenholzii: Rcas_2499
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Entry
Rcas_2499 CDS
T00585
Name
(GenBank) ABC transporter transmembrane region
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rca
Roseiflexus castenholzii
Pathway
rca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rcas_2499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_2499
Transporters [BR:
rca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rcas_2499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
RsgA_GTPase
DUF87
AAA_23
MMR_HSR1
MeaB
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABU58579
UniProt:
A7NM24
LinkDB
All DBs
Position
complement(3221406..3223211)
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AA seq
601 aa
AA seq
DB search
MIPLRRSLTFLKPYWRLSVGAFISLTLAAVANLVTPQVLRMLIDQGIAERNTNALVWLAA
ALVGIALVRGMFSFTSGFWSEKASQAVAYDLRNTLFAKIQGLSFSYHDRAQTGQLMTRIT
SDVEQVRTFIGMGLLQLLNAAALIIGCIGAMLLMNWQLALLVLLTVPLMVGVIGFFMNVV
RPLFDQIQQRLGALNTALQENLAGVRVVQAFAREPYEWQRYNRLNQRLLDANLQSIRAMS
LTFPLIFFIGNLGTLAVIWFGGYQVIGGALTIGELVAFNTYLALLIMPLMMLGMIMAQIT
RAAVSAERIFEVLDVENEVHDRPGARPLPPIKGQVAFERVWFGYGVRADGHAAPDGRHPI
REEKYILKDVSFVAEPGQTVAILGKTGAGKSTIINLIPRFYDVTHGRVTIDGIDVRDVTL
ESLRAQIGIVLQDTTLFSGSVRENIAYGRPDASDAEVEAAACAAQAHEFIMALPNGYHTI
IGERGVGLSGGQKQRIAIARALLRDPRILILDDSTSSVDAETEYQIQLALERLMEGRTSF
VIAQRISTVRRADLILLLDNGRVVAQGTHEALLATSALYGEIIDSQFGGVREEVETAEVE
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgattccacttcgccgttcgttgaccttcctgaagccgtattggagattatcggttggc
gcgtttatcagcctgacgctcgcggccgtcgccaatctggttacgccgcaggtgctgcgc
atgctgatcgatcagggaatcgcagaacgcaataccaacgcactggtgtggctggcggcg
gcgctggtgggaattgcgctcgtgcgcggtatgttcagtttcacgtctggcttctggtcc
gaaaaggcgtcgcaggcggtcgcctacgatctgcgcaacacgctcttcgccaaaatccag
gggttgagtttctcgtaccacgaccgggcgcaaaccgggcagttgatgacgcgcattacc
agcgatgtcgagcaggtgcgcaccttcatcggcatggggttgttgcaactgttgaatgct
gcggcgttgattattggctgcattggcgcaatgctgctgatgaactggcaactggcgctg
ctcgtgttgttgaccgttccgttgatggtcggagtcatcggcttcttcatgaacgttgtg
cggccgctcttcgatcagattcagcagcgtctcggcgcactcaacacggcactccaggag
aatctggccggtgtgcgggtggtgcaggcgtttgcgcgtgaaccatacgagtggcagcgt
tacaatcgcctgaatcagcgcctgctcgacgccaacctgcaatcgatccgcgcgatgtcg
ctgacattcccgcttatctttttcatcggcaacctgggtaccctggcggtgatctggttt
ggcgggtatcaggtgatcggcggcgcactgacgattggcgaactggtagcgttcaatacc
tacctggcgttgctcatcatgccgctgatgatgctggggatgatcatggcgcagatcaca
cgcgcggcggtcagcgctgagcgcatcttcgaggtgctcgatgtcgagaacgaagtccac
gaccgccccggcgcccgcccgttgccgcctatcaaagggcaagtcgcgttcgaacgcgtc
tggtttggctatggcgtgcgagccgatggtcacgctgcgcctgatggacgtcacccgatc
cgcgaggagaagtacattctcaaggatgtctcgtttgttgccgaaccggggcagacggtc
gctattctgggaaaaaccggcgccggcaagagcacaattatcaacctgatcccccgtttc
tatgatgtcacccatggacgggtcacgattgacgggatcgatgtgcgcgatgtgacactg
gagagcctgcgggcgcagatcgggattgtgttgcaggatacaacgctcttcagcggcagc
gtgcgcgaaaatatcgcctatggtcgccctgatgcgagtgatgccgaggtcgaagcggcg
gcgtgcgctgcgcaggcgcacgagttcattatggcgttgccgaatggataccacaccatc
atcggtgaacgcggcgttgggctgtcgggcggacagaagcagcggatcgccatcgcgcgc
gcccttctgcgcgatccgcgcattctgatcctcgacgacagcacctcttcggtcgatgcc
gaaaccgaatatcagattcaactggcgctcgaacggttgatggaagggcgcacctcattt
gtgattgcgcaacgaattagcacggtgcgtcgcgccgacctgatcctgctgctggacaac
gggcgcgttgtcgcgcaaggaacgcacgaagcgttgctggcaaccagtgcgctctacggt
gagatcatcgactcgcagttcggcggggtgcgagaggaagtcgagacggcggaggttgaa
gggtga
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