Roseiflexus castenholzii: Rcas_2703
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Entry
Rcas_2703 CDS
T00585
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rcas_2703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_2703
Enzymes [BR:
rca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rcas_2703
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rcas_2703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Helicase_C
Zn_Ribbon_YjdM
Zn_ribbon_PriA
MarR
DZR
HTH_27
MarR_2
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
ABU58774
UniProt:
A7NMK3
LinkDB
All DBs
Position
complement(3488597..3491197)
Genome browser
AA seq
866 aa
AA seq
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MTAELLADVAVGADAVFTYRVLPPLHSVIQVGHLVWAPLRQRHVQGIVLELYTWGGSLYN
PDDPLSPPRLRSDSLNRSNAHPPTLRDLIDIADPDVSLTPAQIRLARWISEYYRVSLYEA
LSLMLPPGVTRESETSWRATVEGHSATLGALPPGERDVLYLLRRSGEMTERDLRRRLRGS
DAELQAIYAALRERGLIERGMILSRARARPRIERLVRLAVSPDEARAALETLARAPRQRA
LAAYLIDHPEPAPASEALAAAAADTGALRALERRGLVEVIAHEVWRNPLMHISALPDTPP
ALSPAQQKAWDEIARVIDCLKGSSPNDDTDAVQRRFLLYGVTGSGKTELYLRAIARVLRL
GRQALVLTPEIALTTQLVRRFAARFPGRLAVLHSELATGERYDQWRRLRRGDASIAIGSR
SAVFAPLPDLGLIIVDEEHEPSYKHDAAPRYHARDVAQRLAAITGSVLILGSATPSVESY
AASRTGHLRLLELPDRVAMATGPDGLPYTRRLPLPQVIVVDMRRELAENNRSIFSRALQK
ALAETLERDEQAILFLNRRGSASFYMCRDCGHVITCPNCSSPLTLHQEASGQPSSDRSAS
PGLLVCHTCNHRELPPAICPHCWSSRVKSFGIGTQRVVDEIATLFPDARVLRWDRDSVGR
KGDHDRLLDQFLHHEADVLVGTQMIAKGLDLPMVGLVGVVVADTGLYLPDFRAGERTFQL
LTQVAGRAGRRAEGAKSIIQTYTPEHYAIRAAQEHHYHAFYEEEIAFRRQTGYPPFTRLV
RFVYSAGSDVRARRAAESLADEIRVQATKRLTTDWSLIGPAPAFFHVQRNRYRWHLILRA
VDPTPLLNALLLPPGWVIDIDPVHVL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaattgcttgccgatgtcgccgtgggcgccgatgcggtgttcacctaccgc
gtgctgccgccgctgcactccgtgatacaggtcgggcatctggtgtgggcgccgctgcgc
cagcggcatgtgcagggtatcgttctcgaactgtacacatggggcggcagtctgtacaac
ccagacgatcccctcagtccgccgcgcctccgatccgactcgctcaaccggtcaaatgcg
catcctcccacattgcgcgacctgatcgatattgccgatccagatgtgtcgttgacgcca
gcgcagatccggctggcgcgctggatttccgagtattatcgggtgtcgttgtacgaagcg
ctgagccttatgctgccgcctggcgtcacccgtgaatccgaaacctcctggcgcgcaacg
gtggaagggcatagcgccacgctgggcgcgttgcctcctggcgagcgggacgtgctctac
ctgttgcgtcgcagtggcgaaatgaccgaacgcgatcttcgcaggcggctccgtggcagc
gatgctgaacttcaggcaatctacgctgccctgcgcgaacgcggcctcatcgagcgtggt
atgatcctcagccgggcgcgtgcgcgcccccgcatcgaacgcctggtgcgcctcgctgtg
tcgccagatgaagcgcgtgctgcgctggaaactcttgcgcgcgcaccccggcaacgcgct
ctggcggcctatctgatcgaccaccctgagcctgcaccggcctccgaggcgctcgctgcc
gctgccgccgataccggcgcactgcgcgccctcgaacgccggggattggtcgaggtgata
gcgcatgaggtgtggcgcaacccgctgatgcacatcagcgccttgcccgatacgccgcca
gcgctcagcccggcgcagcaaaaggcgtgggacgagattgcgcgcgtgattgattgtctg
aaggggtcttcaccgaacgatgatactgatgccgttcagaggcgctttctgctctacggc
gtcaccggcagcggcaaaaccgaactctacctgcgcgccattgcacgggtcttgcgcctg
ggtcggcaggcgctcgtgctgactcctgaaatcgccttgacgacccaactggtgcgccgc
ttcgccgcccgcttccccggtcgcctggcagtgctgcacagtgaacttgcaactggcgaa
cggtatgatcagtggcgtcggttgcgccggggagatgcgagcatcgccattggatcgcgc
tctgccgtctttgcgccgcttcctgacctgggtttaatcatcgttgatgaagaacacgag
ccgtcgtacaaacacgatgccgcgccgcgctatcacgcgcgcgatgtggcgcagcgcctt
gcagcgatcaccggcagcgtgctcattctcggcagtgccactccatcggtcgagagttac
gctgcctcacgcaccggtcacctgcgattgctagaattgccggatcgtgttgcgatggcc
accggtcctgatggattgccgtatacccgcagactgcccctgccacaggtgatcgttgtc
gatatgcggcgggaactggcggagaataaccgttcgattttcagccgcgcgcttcagaag
gcgctggcggaaacgctcgaacgtgacgaacaggcgatactctttctcaaccggcgcggc
tcggcatcgttctatatgtgccgcgattgcggtcacgttatcacctgcccgaattgttcc
tcgccgttgacgctacaccaggaggcgtccggtcagcccagcagcgaccgatcggcatcg
ccagggctactcgtctgccacacctgtaaccatcgggagttgccgcccgctatctgccca
cactgctggagttcccgcgtcaaatcgtttggcatcggcacgcaacgggtggttgacgag
atcgcaacgctcttccctgatgcgcgcgtattgcgctgggatcgcgacagtgttgggcgg
aaaggggaccacgaccgcctgctcgatcaatttctgcaccacgaagcagatgtgctggtc
ggcacacagatgattgctaaaggtctcgatctgccgatggttggactggtcggcgtggtt
gtcgcagacactgggctgtacctgccagattttcgcgccggtgagcgcaccttccaacta
ttgacgcaggtcgccgggcgggcagggcggcgcgcagaaggcgcaaaatcgatcattcag
acctacacgcccgaacactacgccattcgcgccgcgcaggagcatcattaccacgccttc
tacgaggaggaaatcgcctttcgccgccagaccggctatccgccgtttactcgcctggtg
cgcttcgtctatagcgctggcagcgacgtgcgcgcacggcgcgccgccgagtcgctggca
gacgagattcgtgtacaggcaacaaagcgcctcacgaccgactggagtctcattggaccg
gcacctgccttcttccacgttcaacgcaatcgctaccgctggcacctcatcctccgggca
gttgacccgacgccgcttctcaacgcgctgctcctgccgccgggatgggtgatcgatatc
gatcccgttcatgtgttgtaa
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