Roseiflexus castenholzii: Rcas_2807
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Entry
Rcas_2807 CDS
T00585
Name
(GenBank) FHA domain containing protein
KO
K20276
large repetitive protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_2807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
FHA
HYDIN_VesB_CFA65-like_Ig
FixG_C
Cep192_D4
Yop-YscD_cpl
Cep192_D3
ASH
DUF1573
Ig_GlcNase
Luciferase
Motif
Other DBs
NCBI-ProteinID:
ABU58878
UniProt:
A7NMV4
LinkDB
All DBs
Position
complement(3632063..3636337)
Genome browser
AA seq
1424 aa
AA seq
DB search
MPDINPSNTPDSQSAPPSGDRSPQVAVIDAQSGSVRAIALTSAGITVGRLANNALQLDAP
VVSRNHARIDWDGSRATITDLGSKSGTRLGRVRLTPQTPQVWEPGQEVHIGPYTLRLDIG
APLSSEPSPGAPADVHAAPTQRIAGGAPSGLALALSPVQMALTLIPGEPTDVEVRVTNRT
PAPLTVALVLEGLPELWVEPVPTLRVPPFSMKTTSVRVQAPATVESMVRPYDVRLRAVPQ
EDPSAAADLALEWRVAPFLAGEMQVSPHRVRGRDQAVVTVHLRNNGNAQAAYHLRATDER
QMASVAFAEDRVVLAPGETADIPLTIAAPRRTFGGDLTHALTIEVEEQDDIHGLPSRLLH
DEVRFVQTALLPVWSPLALFVALFLLYGLNVPAVVWSAVPGSGFLAGTQGRNITEESARL
AARATQQAVQGQTALAEAGAALAATQSAVAALPTEQQASAQTALAAAFQATVTSLAAAQT
AEAQALAATGAALEAQLAQTTTAQGPTAAAQAPTGNAPSPTTRPAVTPSPVATALRPTAT
VASSPTAAPQPTTVVAGSGEVDPASIAFGSIKKGTTGAPRTLLLKNTGNAPLTIDEIVIG
GVHAADFARVSGGAENCGASLAPGASCAITLTFTPAAAGQRTGQLRIETSSAGGVLLVSL
SGSGTEIPEVASIVRVGGSPTNAASVQFQVNFSEAVKGVSAANFSLVTLGGAVGASIASV
SPASGTSTNQWTVTVNAGGGNKTIRLDFVNSNGVTNVDGNAVEKLPFNAGDQIVIDTTPP
TVTLGNTPPLLTNNPAIPFTFTGSDDVSPSVTFECRIDSASFAPCTSPLTPAGLADGSRT
FNVRSRDLAGNISTPAAYTWTIDTNPPNTSISDGPSVGSTTGPAVAFTFTSEPGATFECR
LNTAAFSPCTSPQNLTGLTTGVYTFSVRAIDAAGNIDASPASRTWTVDATPPDTSITGGP
AAGSTTGPNVSFTFSSEAGATFECRLNTAAFSPCTSPQNLTGLTTGVYTFSVRAIDAVGN
IDPTPASRTWTVDATPPDTSILSGPTGTISATSVTFTFTSTESVSTFQCRLNTGSFASCT
SPHTITGLTHGSQTFEVRAVDSVGNVDPTPASRTWTVDTQPPETTITTGPADSSTTGPSV
TFNFTSSESGSTFECSVDGGAFLACSSPQNLSLANGTHTFAVRAIDSVGNIDPTPASRTW
TVDAIPPAVTSVTSSTSDGTYGVGASINITVNFGESVALSGGSLQVTLNTGVTISIAPFS
GVSASGTYVVGAGQNTGDLNSTGLTLTAGATLRDAAGNNAVLTIPTGQSLADLRDIVIDT
TPPPAPTVTIPSTPTTVLSTTTTFNIQGTAEANSLVQVWNDANNNGAIDTGESVAASQQL
TGGGTSFSISVTLATGDNNFVVTATDAANNRSTPTDVPTITRDT
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacatcaacccatccaacacccccgactctcaatctgcgcctccgtctggggac
agatcgccgcaggttgccgtgatcgatgcgcagagcggttcggttcgcgcgattgcgctg
acgtccgctggaataacggtcgggcgtctggcaaataacgcgcttcaactcgatgctccg
gttgtttcgcgcaaccacgcgcggatcgactgggacggcagccgcgccaccattaccgat
ctgggatcgaaaagcggcacgcgcttgggtcgtgtgcgcctcacgccgcagacgccacag
gtttgggagccgggacaggaggtgcacatcggtccatatacgctgcgcctcgatattggg
gcgccattgtcgtcggaaccatcgccaggcgctcctgccgatgtccatgctgcgccgact
caacggatcgcgggaggcgctccgtcgggattggcgcttgcgctgtcgccagtgcagatg
gcgttgacgctgatccccggtgaaccgacggatgttgaggtgcgcgtcactaaccggact
cccgctccactaactgttgcgcttgtgctcgagggtctgcccgaactgtgggtggaaccg
gtcccaacgctgcgtgtgccgccgttttcgatgaagacgacgagtgtgcgtgtgcaggcg
cctgccaccgtggagagcatggtccgtccctacgatgtgcgcctgcgcgccgtgccgcag
gaagatccgtctgccgctgccgatttggcgctggaatggcgtgtggcgccatttctggcg
ggtgagatgcaggtctcgccgcatcgggtgcgtggacgtgaccaggcggtggtgaccgtt
catctgcgcaataacggtaatgctcaggcggcgtaccatctgcgcgcaaccgatgagcgc
cagatggccagcgtcgcgtttgccgaggatcgtgttgtgctcgcgccaggagagacggca
gacataccgctgacgatagccgctcctcgccgcaccttcggcggcgacctcacccacgcg
ctgaccatcgaggtcgaggagcaggacgacattcatggtttaccctcccgtctcctgcat
gatgaggtgcgttttgtgcagacggcgctgctgccggtctggtcgccactggcgctgttc
gtggcgctcttcctgctctatgggctgaatgtgccggcggtggtgtggtctgccgttcct
ggcagcggctttcttgccgggacacagggccggaatatcactgaggagtcggcgcgcctt
gctgcgcgcgcgacccagcaggcagttcagggacagacggcgcttgctgaagcaggcgcg
gcgctggcggcaacccaatctgcggtagcggcgttgccgaccgaacaacaggcaagcgca
caaacggcgcttgccgcagcgtttcaggcgacagtcacctcactggcagcagcccagacg
gcagaagcgcaggcgctggcagcgaccggcgcggcgctcgaagcgcaactggcgcaaact
acgaccgcgcagggtccgactgctgcggcgcaggcgcctaccggcaacgcgccatctcct
accacgcgcccggcggttaccccatctccggttgcaacggcgctgcgtccgactgccacg
gttgcgtcgtcgccgacggcggcgccgcagccaacgactgtggtcgcaggcagcggtgag
gtcgatccggcatcgattgcgtttggcagcatcaaaaaaggaacaaccggagcgccgcgc
acgctgttgctgaaaaataccggtaatgcgccgctgacaatcgacgaaatcgtgatcggt
ggcgtccatgcagccgattttgcgcgcgtcagtggtggcgccgagaactgcggcgcgtcg
ctggcgccgggcgcctcgtgtgcgattaccctgaccttcacgccagcagcggcggggcaa
cgcacgggccagcttcggatcgaaacctcgtccgctggcggggtcttgctggtgagcctg
agtggatcagggaccgaaatccctgaagtggcctcgattgtgcgcgtcggcggtagtcca
accaacgctgccagtgtgcagttccaggtcaatttcagcgaagcagtcaaaggcgtctcg
gcagcgaacttcagcctggtcacccttggcggcgcggttggcgccagtattgcgtcggtc
tctcccgcaagcggtacgtcaaccaaccaatggacggtgacggtgaatgcgggtggcggc
aacaagaccatccggctcgattttgttaatagcaatggtgtgaccaacgtcgatggtaat
gcagtagagaaattgccgttcaacgctggcgaccagattgtgatcgatacgacgccgccg
actgttacgctgggcaatacgccgccattgttgacaaataatccggcgataccgtttacg
tttaccggtagcgacgatgtaagccccagcgtgactttcgagtgccgtattgatagcgcc
agttttgcgccctgcaccagtccattgacccctgcgggcctggctgatggcagtcgcacc
ttcaacgtgcgctcgcgcgacctggcgggaaatatcagtacgccagcggcgtatacgtgg
acaatcgacacgaatccccccaatacgtctatctctgacggtccttcggttggaagcacc
acgggaccagccgttgcctttacgttcacgtccgaacccggcgcaacattcgagtgccgg
ttgaataccgctgcattttcgccatgcaccagccctcaaaatctgaccggactgacgacc
ggtgtgtataccttcagcgtgcgcgccatcgatgcagccgggaacatcgatgccagcccg
gcgagtcgcacctggacggtcgatgcaaccccgccggatacgtcgattaccggaggaccg
gcagccggtagcacgactggtccgaatgtgagttttaccttctcgtcggaagcaggcgca
acattcgagtgccggttgaataccgctgcattttcgccatgcaccagccctcaaaatctg
accggactgacgaccggtgtgtataccttcagcgtgcgcgccatcgacgcggtcgggaac
atcgatccaacgcctgccagtcgcacctggacggttgatgcaaccccgccggatacgtcg
attctcagcggaccgaccggcactatcagtgcaaccagcgttacctttacgttcacttcg
accgagtcggtttcgacgttccagtgccgtttgaatactggatcgtttgcaagttgcacc
agcccgcacacaattaccggtttgacgcacggttcacagacgttcgaggtgcgcgccgtt
gactcggtcggcaatgtcgatccgacgcctgccagtcgcacctggacggtcgatacacaa
cctccggaaacaacaatcaccactggtcccgccgacagtagcacaaccggtccgtcggtg
acattcaactttacttcttccgaatctggcagcaccttcgagtgcagtgtggatggcggt
gcattcctggcatgttcttcgccgcagaacctgtcgctggcgaatggcacgcatacattt
gcagtgcgcgccattgactcggtcggcaacatcgatccgacgcctgccagtcgcacctgg
acggtcgatgccataccgccagccgtgacaagtgtgacctcctcgacgtcggatgggacg
tatggggtcggcgccagcattaatatcacggtcaactttggcgagtcggtcgcgctgagc
ggcggttcgctccaggtgacgcttaacaccggtgtgacgatctccattgcgcccttcagt
ggcgtcagcgccagtggaacctatgtggtcggtgcggggcagaacactggcgatctcaac
tccacggggctgacgctgacggctggggcaacgctgcgtgatgcggcggggaataatgcc
gtgctgaccattcctacgggccagtcgctagcggatctgcgcgatattgtgattgataca
accccgcctcccgctccgaccgtcaccattccgagcacgccaacaacggttctatctacg
acgacaaccttcaatattcagggaactgctgaagccaacagtctcgtgcaggtatggaac
gatgccaataacaatggtgcgatcgacacgggtgagagtgtcgcggcctcgcaacagttg
accggcggcgggacaagtttttcgatcagcgtgacccttgcgaccggcgacaacaatttt
gtcgtgaccgccaccgatgctgccaataatcgttcgacgccaaccgatgtgccgacgatc
accagagatacatga
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