Roseiflexus castenholzii: Rcas_2917
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Entry
Rcas_2917 CDS
T00585
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rcas_2917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_2917
Enzymes [BR:
rca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Rcas_2917
DNA repair and recombination proteins [BR:
rca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rcas_2917
Prokaryotic type
Rcas_2917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ABU58979
UniProt:
A7NN47
LinkDB
All DBs
Position
3780227..3781180
Genome browser
AA seq
317 aa
AA seq
DB search
MTIHRSIDQNHEHSLSLNDLHQALLKWFSEAARDLPWRRTRDPYRILVAEVMLQQTQVDR
VLPKYAAFLERFPTLHTLAEAPTAEVIRMWAGLGYNRRAVNLQRAARAICARYGGVFPRD
VATLVTLPGIGSYTAGAVACFAFEQDVAFMDTNIRRVIRRVFTDPTETVNERALLALARA
ALPVGRSWMWNQALMELGSLVCTADAPACWRCPLRDQCRDYAARRESDERFASAPVRKRL
AERRERPFIGSNRYFRGRIIEALRMLPSGATFALNDLGPQVRPEYTPDDEVWLTTLIRGL
ERDGLVVWTETGVRLPE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacataggagtatcgatcagaaccacgaacattcattaagtcttaacgatctc
catcaggcgcttttgaagtggttcagcgaggcggcgcgcgatcttccctggcgccgcacc
cgtgatccataccgcattctggtggcagaagtaatgctccagcaaacacaggttgatcgg
gtgctgccgaagtacgcagcgttcctcgagcgttttccgacattgcacacactggcggaa
gcgccaactgccgaggtcatccgtatgtgggctggtctgggttacaatcggcgggccgtc
aatctgcaacgcgcggcgcgcgcgatctgcgcgcgctacggtggcgttttcccacgggat
gtcgctaccctggtcacattgccgggcatcgggtcctacaccgccggcgcggttgcctgc
ttcgccttcgagcaggatgtagcgttcatggacacgaacattcggcgcgtgatccggcgc
gtgttcaccgatccgacggaaacggtcaatgaacgcgcgctgctggcgctggcgcgcgcg
gcgcttcccgtcggtcgcagctggatgtggaaccaggcgctgatggaactggggtcgctc
gtttgcaccgccgatgcgccggcatgctggcgctgcccgttgcgcgatcagtgccgcgac
tatgctgcgcgacgcgaatcggacgagcgttttgcgtccgcgccggtgcgcaagcgcctc
gccgaacgtcgtgaacgcccgtttatcggctcgaatcgctacttccgtgggcgcatcatc
gaggcgctccgcatgcttccgtctggcgcgaccttcgcgctgaacgatctgggaccgcag
gtgcgcccggagtacacacccgacgacgaagtatggctcacaacgctgattcgtgggttg
gaacgcgatggactggtagtgtggaccgagacgggggtacggttgccggaatag
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