Roseiflexus castenholzii: Rcas_3001
Help
Entry
Rcas_3001 CDS
T00585
Name
(GenBank) putative transcriptional regulator, GntR family
KO
K05825
2-aminoadipate transaminase [EC:2.6.1.-]
Organism
rca
Roseiflexus castenholzii
Pathway
rca00300
Lysine biosynthesis
rca00630
Glyoxylate and dicarboxylate metabolism
rca01100
Metabolic pathways
rca01110
Biosynthesis of secondary metabolites
rca01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rcas_3001
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rcas_3001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Asp_aminotransf
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABU59058
UniProt:
A7NNC5
LinkDB
All DBs
Position
complement(3894042..3895193)
Genome browser
AA seq
383 aa
AA seq
DB search
MLPVVQIVHRPGILDLGWGHPDPAVLPVASIQRAATTVLARYGADALAYGAERGPGPLIA
WICSRLKRTDARAPDPVEVVITAGASQTLDLLCTLCTHPGDVVLVESPTYHLAVRILRDH
PLNLVAVPSDADGIDVDALKSLLERMARRGRTARLLYFVPTHHNPTGVCMSLERRRALAA
VAAAYGVLLVEDDVYRELSYDAPAPPSVWSLAPPGIVARIGSFSKSLAPGLRLGYLTADA
SLTRRLIGSGLLDSGGGLNPFVALTVAEVCTSGDFDATIARLCATYRERRDALAGGLRDY
LPPGCHCTVPGGGFFQWVALPEGIDAGELLPFAESMGVSYLPGSRFYLDAPRRNTLRLAF
SLYQPPQLIEAARRLGEAIATVV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctccctgtcgttcaaatcgttcatcgtcccggcatcctcgatttggggtgggggcat
cccgatcctgccgtgttaccggtcgcatccatacaacgtgccgcaacaaccgtgctcgcg
cgctacggcgccgatgccctggcgtatggcgccgagcgcggaccaggaccgctgatcgcg
tggatctgctctcgtctgaagcgcaccgatgcgcgcgcgcctgatccggttgaggtggtg
atcaccgctggcgcctcgcagacgctcgatctcctctgcacactctgcacgcatcccggc
gatgtcgtgctggtcgagtcgccgacgtatcatctggcggtgcgtatcctgcgcgatcat
ccgctgaatctggtcgccgtcccttccgatgccgacggcattgatgttgatgcgctgaaa
agtcttctggagcggatggcgcggcgcggcagaacggcgcgtctgctctacttcgttccc
acgcaccacaacccgaccggcgtatgcatgagccttgaacgtcgcagagcgctggcggca
gtcgccgcagcgtatggggtgctcctggtggaagacgacgtgtaccgtgaactgagttac
gatgctcctgcgccgccgtcagtgtggagtctggcgcctccgggcatcgtggcgcgcatc
ggctccttctcaaaatcgctggcgccagggttgcgcctgggctatctgactgctgatgcg
tcattgacccggcgattgatcggcagcggattgctcgacagcggcggtggtctcaaccct
tttgtggcgctgacggttgccgaagtctgcacatcgggcgatttcgatgcaacaattgcg
cgcctttgcgccacttaccgtgagcgacgtgatgcgctggcaggtggtctgcgtgattac
ctgccgccgggatgccattgtaccgtgcccggcggcggtttctttcaatgggtggcattg
ccggaagggatcgatgccggggaattgttgccgttcgccgaatccatgggggtctcatac
ctgcccggatcacggttttatctcgacgcgccacgacgtaacacgctccggttggcattc
agcctgtaccaaccgcctcaactcatcgaagcggcgcggcgtctgggagaagccattgcg
accgtcgtctga
DBGET
integrated database retrieval system
