Roseiflexus castenholzii: Rcas_3142
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Entry
Rcas_3142 CDS
T00585
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K03437
RNA methyltransferase, TrmH family
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rca03016
]
Rcas_3142
Transfer RNA biogenesis [BR:
rca03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Rcas_3142
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-ProteinID:
ABU59196
UniProt:
A7NNQ2
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All DBs
Position
4072871..4074361
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AA seq
496 aa
AA seq
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MSSRPNRMSGIAPAQKKRRQKDLCQHDAWCPIAPRRYASRLQSQEERRQFQKERCVAVVI
ENPDAARSALIDLLRREYTVDHDALIADVFGADQAGLCVLASGWGSIEGVLASQPETRCA
ATTRALVVAAHERALRDLLLAAPRGDVLLFLVVGNWTLPTLAELFDGREVAPYPLLSYPG
IHLFVGVRRGSGALPVIDDNTLFRGPPLAHAALPRPAGGQNLSSARDPMVARLRDLGNAA
GRRARGQFLAEGPLLAFRALDDLPVEDLFYTGELLRDPAGTVLLRRAADLGVPAHRISEG
LMGLITPTRPIPSVITAIWGQLRNVADYRPGRRAVILATEQINNPENLGMTLRTADAAGV
EAVIVAGSGADPFHRECVRAARGAVGRIPIYTCADLPTWVGQARARGIHVVGATGNVERT
LYDADLPLPLMIIVGNETEGLTDATLAVCSSLVRIPMAPGQDSLNVGVAAGVILYDIVRR
RLCDRHLAPTKNPTTA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgtccaaaccggatgtcggggattgcccccgcacagaagaagcggcgacag
aaggacctctgccagcacgatgcgtggtgtcccatcgccccgaggcgctacgcatcacgc
ctgcaatcccaggaagagcgtagacaattccagaaggagagatgtgtggctgtcgttatc
gaaaaccccgacgccgcccgctcagcgctgatcgacctgctgcgccgggaatatacggtt
gaccacgatgccctgatcgccgatgttttcggcgccgaccaggcagggctgtgcgttctc
gcgtcggggtggggaagcatcgaaggcgtgctggcatcccaaccggagacgcgctgtgcc
gccacaacgcgcgcactagtcgttgctgctcacgaacgcgcactgcgcgacctcctgctt
gctgcgccacgcggcgatgtgctcctgttcctggtcgtcggcaattggacgctgccaacg
cttgctgagttgttcgatgggcgcgaagtcgcgccgtacccactgttgagttaccccggc
atccacctctttgtgggagttcgtcgtggcagcggagcgcttcctgtgatcgacgacaac
accttgtttcgtggcccgcccctggcgcacgccgccctgccgcgcccggccggcgggcag
aacctcagtagcgccagagacccgatggtcgcccgtttgcgcgaccttggcaatgcagca
gggcggcgcgcgcgcggccaatttcttgccgaaggaccactcctcgccttccgcgccctc
gatgatctgccggtcgaagacctgttctataccggcgagttgctgcgcgacccggcaggc
acagtgttgcttcggcgcgcggcagacctcggcgtacctgcgcaccgcatctccgaaggg
ctgatggggctgatcactcccacccgcccaatccccagcgtcatcactgcgatctgggga
caattgcgcaacgtcgccgactaccgacccggcaggcgcgccgttattctagcgaccgag
cagatcaacaatcccgaaaacctgggcatgacgctgcgcactgccgacgccgccggggtc
gaggcagtgatcgtggcgggcagcggcgccgatccattccaccgcgaatgtgtacgcgct
gcgcgcggcgccgtggggcgcatcccgatctatacctgcgccgatctccccacctgggtc
ggtcaggcacgcgcacggggcatccacgtcgtcggcgcaaccggcaacgtcgagcgcacc
ctgtacgacgccgatctgccattaccgctgatgatcatcgtcgggaacgaaaccgagggt
ctgaccgacgcgacgctggcggtctgctcgtcgctcgtgcgcatcccgatggcgccgggg
caggactcattgaacgtcggcgtagcagcgggggtgatcctgtacgacatcgtgaggagg
aggttatgtgaccgtcacctcgcgccgaccaaaaacccaaccactgcctga
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