Roseiflexus castenholzii: Rcas_3207 Help Entry Rcas_3207         CDS       T00585                                  Name (GenBank) WD-40 repeat protein Organism rca  Roseiflexus castenholzii SSDB OrthologParalogGFIT Motif Pfam:  nSTAND1 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N EIF3I Tricorn_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR19_1st DSE1_N WD40_MABP1-WDR62_1st PD40 Beta-prop_SCAP AAA_16 NBCH_WD40 Tricorn_N Ge1_WD40 WDR90_beta-prop_4th NACHT Beta-prop_IFT140_1st ASA1 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N AAA_22 nSTAND6 nSTAND3 Beta-prop_Vps41 PEP5_VPS11_N RsgA_GTPase ABC_tran Proteasome_A_N AAA_29 Beta-prop_EIPR1 Beta-prop_WDR41 Motif Other DBs NCBI-ProteinID:  ABU59261 UniProt:  A7NNW7 LinkDB All DBs Position complement(4166972..4170445) Genome browser AA seq 1157 aa AA seqDB search MTDHSPSAGMPDHEMLAYPSFAALRAAHTNLLRRQRDEGLTPSVLGQAVELIARGSAAGV LLEDEDERNAAQGLLDYWATILIRKGYESPNATLEEFDPSLAPELDDDHCPYVGLDPFRE EDAARFFGRRRLVEFLINRLHDQRMLALLGPSGAGKSSVVRAGLIPALKQNALPGSGNWR YPPVITPGEQPLLHLACVLRRLNSQPDDLARDEELAEQLRDPQQVVAACDGPEPVVLVVD QLEELFTLTDDESERHAFVEAMVALVEHPSTRHIVLTTMRSDFESFIALEPSLQRWMERA RVQLLPLSASEMREAIERPAELAGLKFEPGVVDALLHDTLGEPAALPLLQFSLLKLWDAR DRNRVTWEAYQRIGGGRQALARSADALYNNLIPEDQVTARRILMRLVRPGEGLEITSNRI RRDQLYRAGEARDRVDRVLERLIAARLVRLTPGDTPGSAQIEVAHEALVRNWPTLVNWLE DERAAIATRRRLEAKAAEWVRLGSGAAGLLDEVQLAEAERWLNSAEAAYLGYDEALLDLV TASRAAIDQARRTEEEQRRRELEQAQALAEARRIQAEQNEKLAIEQGKRAEAEARSAQRL RLVVMTMTFALIGALILGIMLFVQQSQLRATASELATQVGISNLALVTAQVAVENARVAA NRARIAAATSQAAESLALLRGTQAALAATQESYARRTAESLVPALERQARQSRAGQLAAL AQAEREDRPVLSLLLAIEAVQVTLQKGEAPVPIADAVLRGSLARIGGVGLWIGSPVVAAA TSDNGSVAALLTADGTLQVWNLTNLSRSPRIASAPGSPTLLALSRDGARLATAGADPTSL RLWDLAGTTLTARELAGPGGTNTAMALSRDGRRLAIGDNQGATFVYDLTNLSASPQRLSG LGGRSGIRSLTFSPDGRLLATGNDDSQARLYNLASGSGTYTRERTRGALTSITFSSDGRW LAYGSAGGQVRLWRLSGMQFDSVYVLLGLTAQVTEVRIASGNALVIAGSADGTTCLWDLE ARNDNRARVVLRGQSAQITGLALNGDASRLATASADGQVALWDLNVADPGVKPVILRGHD GAVTGVAIPVNTSLMLTTGVDGMARVWNLNAPLSTPESLPQAGADLINIACRTAGRTLSE SEWNTYFEGMPYRPSCR NT seq 3474 nt NT seq  +upstreamnt  +downstreamnt atgaccgatcattcaccttcggcagggatgcccgaccacgagatgctggcatatccctca tttgcagcattgcgcgcggcgcatacgaacttactccgccgccaacgcgacgaggggttg acgccatctgtgctggggcaggccgtcgaactcattgctcgcggcagcgccgccggtgtg ttgctcgaagatgaagatgagcgcaacgctgcacaggggttgctcgattattgggcgacg attctgattcgtaaagggtatgagtcgcccaacgcaacgctcgaagagttcgatccgtcc ctcgcgccagaactggatgatgatcactgcccttacgtcgggttagacccgttccgtgaa gaagatgcggctcgcttcttcggcaggcggcgcctggttgagtttctgatcaaccggctg catgaccagcggatgctggcgctgcttggtccttctggcgccggcaaatcgtcggtggtg cgcgcggggttgatccctgctctgaagcagaatgccctgcccggcagcggcaactggcgc tacccgccggtgatcacgccaggagagcaaccgctgctgcacctggcgtgcgtcctgcgt cgtctgaatagtcaacccgatgacctggcgcgtgatgaggaactggcggaacagttgcgg gacccgcagcaggtggttgcagcgtgtgatggacctgagccggtggtgctggtagtcgat cagttggaagaactgtttactctgaccgatgacgaatcggagcgccacgcatttgtcgag gcgatggttgccctcgtggagcatccatccacccggcatatcgtcctgacgacaatgcga agcgacttcgagagttttattgcactcgaaccgtcgcttcagcggtggatggaacgagcg cgggttcaactgttgccgctcagcgccagtgaaatgcgtgaggcgattgaacgtccggcg gaactggccggtctcaaatttgagccgggggtcgtcgatgcattgttgcacgacaccctc ggcgagccggcagcgttgccgctactccaattctcgttgctcaaactctgggatgcgcgt gaccgcaatcgcgtcacgtgggaggcgtatcagcggatcggcggcggacggcaggcgctc gcgcgcagcgccgatgcgctctacaacaacctcatcccggaggatcaggtgaccgcgcgc cgtattctgatgcgcctggtgcgtcctggtgagggtttggagatcaccagtaatcgcatc cggcgtgatcaactctatcgcgccggcgaagcgcgtgaccgggtggatcgtgtgcttgaa cgtctgatcgctgcacgcctggtgcgtctcactcccggtgacacgccggggagtgcgcag atcgaggtcgcccacgaggcgctcgtgcgcaactggcccaccctggtcaactggcttgag gatgagcgcgcggcaattgcaacccgccgccgcctggaggcgaaggcggcggaatgggtg cggctcggcagcggcgccgccggtttgctcgatgaggtgcaactggcggaagccgaacgc tggttgaatagcgccgaagccgcttacctggggtacgacgaagcgttgctcgatctggtg actgccagtcgcgcggctatcgatcaggcgcgacgcaccgaggaagagcaacgtcgccgt gaactcgaacaggcgcaggcgttggcggaagcgcgtcgcattcaggcggaacagaatgaa aaactggcaatcgagcaggggaaacgcgccgaagccgaagcgcgctcggcacaacggttg cgcctggttgtcatgacgatgacctttgccctgatcggcgctcttatattgggcatcatg ctctttgtgcagcaatcgcaactcagagcaaccgcttccgaactggcgacccaggtcggt atctccaacctggcgcttgtcaccgcccaggtcgctgttgagaacgcccgcgtcgccgcc aaccgggcgcggatcgccgccgccacctcgcaggctgccgaaagcctggcgctgctgcgc ggcactcaggcggcgctcgcggcaacgcaggagtcatacgcgcgtcggactgccgagtcc ctcgtccctgcactcgaacgacaggcgcgtcagtcccgcgccggtcaacttgcggcgctg gcacaggcggaacgtgaagatcgcccggttctcagcctcctgctggcaatcgaagcagtg caggtgacgcttcagaaaggcgaagcgcctgttccgatcgctgatgccgttttgcgcggg tcgctcgcgcgcatcggcggcgtggggctgtggattggcagtccggtggtcgctgccgca accagtgacaacggcagcgtggctgcgctcctaaccgccgatggtacgcttcaggtctgg aacctgaccaatctgagccggtcgccgcgcattgccagcgcccctggttcaccaaccctc ctggcgctttcgcgcgacggcgcgcgtctggcgacagccggcgccgatccgaccagtctt cgcctctgggacctcgccggcacgacgttgaccgcgcgcgaactcgcaggaccgggagga accaacaccgccatggcgctcagccgcgatgggcgccgtctggcaatcggcgataaccag ggcgccacctttgtgtacgatctgacgaatctttcggcgtcgccgcagcgactaagcggt cttggcggtcgcagcggcattcgttcgctcacgttcagtcccgatggacgtctgctggcg accggcaacgacgatagccaggcgcgactctacaatctcgcctccggttctggaacgtac acgcgcgagcgcacccgcggcgcgctgacctcgatcaccttcagcagcgatggacgctgg ctcgcctatggcagcgcaggcggacaggtgcgcctctggcgtctgagtggcatgcagttc gactcggtctatgtgctgcttggcttgacagcgcaggtgacggaagtgcgcattgcgtcc gggaatgcgctggtcatcgccggcagcgccgacggaacgacctgtctctgggacctcgaa gcacgcaacgataaccgggcgcgtgtggtgttgcgcggtcagagcgctcaaataacagga ttggcgttgaacggcgatgccagtcgtctggcgactgccagcgccgatgggcaggtggcg ctgtgggacctgaatgtcgccgatcctggtgtcaagccggtgatcctccgcggtcacgac ggcgcagtcaccggtgtggcgataccggtgaacacttcgctgatgctgaccacaggcgtc gatgggatggcccgcgtttggaacctgaatgcgccgctctctactcctgagtcattaccg caggcaggcgctgacctgatcaacatcgcctgccgcaccgcagggcgaacgttgtcggaa agcgagtggaacacgtacttcgagggaatgccgtaccgcccttcctgtcgataa

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