Roseiflexus castenholzii: Rcas_3335
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Entry
Rcas_3335 CDS
T00585
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca00061
Fatty acid biosynthesis
rca00071
Fatty acid degradation
rca01100
Metabolic pathways
rca01212
Fatty acid metabolism
rca02024
Quorum sensing
rca04146
Peroxisome
Module
rca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rcas_3335
00071 Fatty acid degradation
Rcas_3335
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rcas_3335
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_3335
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rca01004
]
Rcas_3335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rca04147
]
Rcas_3335
Enzymes [BR:
rca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rcas_3335
Lipid biosynthesis proteins [BR:
rca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rcas_3335
Exosome [BR:
rca04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rcas_3335
Exosomal proteins of breast cancer cells
Rcas_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABU59385
UniProt:
A7NP89
LinkDB
All DBs
Position
4351226..4352764
Genome browser
AA seq
512 aa
AA seq
DB search
MLNLAIILEESARRMPGKTAVILDSIRLNYAELNGAANKIANGLANLGVRPGDKVAMMIP
NTPHFPMCYFGILKAGATVVPLNVLFKRDEVRYHLEDSDSVALIVWEGFLDEAASGFHAV
KTCRHLIVAQAPGSTATLPDGAIPLGSLLAEHAPVFDTVQTMPDDTAVILYTSGTTGRPK
GAELTHANMFLNATICTDKLLNVSSETVGLAVLPLFHSFGQTCVMNSLIYAGGAITMLPR
FEPQKALEVMARDRVTYFAGVPTMYFYLLNFPGADQYDLSALKFCVSGGAAMPVEVMHAF
NRKYNVTILEGYGLSETSPVASFNHLDREPKPGSIGVPIWGIEMRVVDDQGREVPNGELG
EIVIRGHNVMKGYYKRPDATADAIRNGWFHSGDIAYRDDDGFFFIKDRVKDMIIRGGFNV
YPREIEEVLYGHPAIAEAAVIGVPDQALGEEVKAVVALKPGHTATETEIIEYCKERLAAY
KYPRIVEIRETLPKTATGKILKRELRQIEVTA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatctcgccattattctggaggagagcgcgcgccggatgcccggaaagactgct
gtcatcctcgacagcattcgcctgaactatgccgaactaaacggcgccgccaacaaaatt
gccaacggtctggcaaatctcggcgtgcgccctggcgacaaagtggcgatgatgatcccc
aacacgccacacttcccgatgtgctatttcggcattctcaaggctggcgcgacggttgtg
ccgctcaatgtgctattcaagcgcgatgaggttcggtatcatctggaagacagcgactcg
gtcgcactgatcgtctgggaaggattcctcgatgaagccgcgtccggctttcacgcggtc
aaaacctgccgtcacctgatcgtcgcgcaggcgccgggttccacggcgacactccccgat
ggcgcgattccgctcggcagtctcctcgccgaacacgctccggtattcgatacggtccag
accatgccggacgatacggcggttattctctacaccagcggcacgacgggtcgccccaag
ggcgcggaactgacccatgccaacatgttcttgaatgccacgatctgcaccgataagttg
ctgaatgtctcgtcagaaacggtggggctggcggtactgccattgtttcacagttttgga
cagacgtgtgtgatgaacagtctgatctacgccggcggcgccatcaccatgctgccgcgc
ttcgaaccgcagaaggcgctcgaagtgatggcgcgcgaccgggtgacgtatttcgccggc
gtgccgacgatgtatttctatctgctcaatttccccggcgcagatcagtatgatctgtcg
gcgcttaagttctgcgtctcaggcggcgcagcgatgccggtcgaagtgatgcatgccttc
aaccgtaaatacaatgtcaccatcctcgaagggtacggtctctccgaaacttctccggtg
gcgtcgttcaatcatctcgaccgcgagccaaagccggggtcgatcggcgtgccgatctgg
ggcattgagatgcgcgtggtggatgaccaggggcgcgaggttcccaacggcgaacttggt
gagattgtcattcgtgggcacaatgtgatgaaggggtactacaagcgtcccgacgcaact
gctgatgcgattcgcaatggctggttccacagcggcgacatagcctatcgtgacgatgac
ggtttcttcttcatcaaggatcgcgtgaaggatatgatcatccgcggcgggttcaatgtc
tatccgcgcgagatcgaagaggtgctctacgggcatccagccatcgccgaagcggccgtc
attggcgttcccgatcaggcgcttggcgaggaggtcaaggcggttgtcgccctgaagcca
gggcatacggcaaccgagacagagattattgagtactgtaaggaacgcctggctgcctac
aagtatccgcgcatcgtcgaaatccgcgagacgttgcccaagacggcgaccggcaaaatc
ctcaagcgcgaattgcgtcagatcgaagtgactgcatag
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