Roseiflexus castenholzii: Rcas_3398
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Entry
Rcas_3398 CDS
T00585
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rcas_3398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_3398
Enzymes [BR:
rca01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Rcas_3398
Transporters [BR:
rca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rcas_3398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
RsgA_GTPase
AAA_29
AAA_22
AAA_30
Zeta_toxin
MMR_HSR1
SbcC_Walker_B
nSTAND1
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABU59448
UniProt:
A7NPF2
LinkDB
All DBs
Position
4430214..4432010
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AA seq
598 aa
AA seq
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MMINRRSRHMLNAGEMLPVRAVDWRRLLTYLNPYRRHMAGALLALTGASAINLGFPLVIV
QLLEAVLQQGNQTLLTNLTLALIALFFIQALLTFLQGYMLNIVGERIVLDMRVQLYRHLH
ALSLSFFANRRVGELVSRISSDVTQVRAILTNNVTQFLSSIVALIGAIIIVFLLNPRLVG
FVLALAISVVAVAAIFGRWLQRFSTRVQDELADATVAVEEGLQGVRVVKSFVRESYEIER
YERAMQRTLKAALRLALLRSGFGGLMAFLGFSGIAAILWFSGSEVLAGRMSFATISGFLI
YAITIGASLAQLSGLYGQFREAVGAVRRVFEILDTQPTIKDVPDACDLPPVRGEITFDHV
SFEYETGQGVLHDITLTVQPGEIVALVGPSGAGKSTLFNLIPRFYDPTSGRVLIDGYDLR
SVTQRSLREQIGLVPQETMLFGGTIRENIVYGKLDANEEDIIAAAKAANAHDFIMAMPRG
YDTLVGERGIKLSGGQRQRIAIARVMLKNPRILLLDEATSSLDSESEALVQEAFERLMRG
RTSVIIAHRLSTVSIAHRIIVLNHGRIVEQGTHEELLAQQGLYARLYALQFREGVTVG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaaccggcgttcgcgccatatgctcaatgctggcgaaatgcttcctgttcgc
gccgttgactggcgccgtttgttgacgtacctgaacccctaccggcggcatatggcaggc
gcgctgctggcgctgacgggtgcaagcgccatcaatctcggcttcccgctcgtcattgtg
caactcctggaagcggtgcttcagcaaggcaatcagacgctgctgacaaacctgacgctg
gcgctgatcgctcttttctttatccaggcattgctgacatttttgcagggttacatgctc
aacatcgtcggcgagcggattgtcctcgatatgcgggtgcagctgtatcgccacttgcac
gcgctatcgttgagtttcttcgccaaccggcgcgttggcgaacttgtgtcgcgcatttcc
agcgatgtgacgcaagtgcgcgccatcctgacgaacaatgtcacccaattcctgtcgagc
attgttgcgctgatcggcgcgatcatcattgtgttcctgctcaacccgcgattggtgggg
ttcgtgttggcgctggcgatcagcgtcgtcgccgttgcggcaatctttggacgctggctg
caacgcttcagcacccgcgtgcaggacgaactggcagacgcgacggtggcggtcgaagag
ggattgcagggcgtgcgggtcgtcaagagtttcgttcgcgagtcctatgaaatcgaacgg
tacgaacgcgcgatgcagcgtacgctgaaggcggcgttgcgcctcgcgctgctgcgatcc
gggttcggcggcctgatggcgtttctggggttcagcggcatcgcggcgatcctctggttc
agcggcagtgaggtgctggcaggacgaatgtcgtttgcgacgatcagcggttttctgatc
tacgccatcaccattggcgccagcctggcgcaactctccggtttgtatgggcagttccgc
gaagcagtcggcgcagtgcggcgtgtctttgaaattcttgatacgcaaccaacgatcaaa
gacgtgccggatgcatgtgatctgccgccagtgcgcggcgagatcacgttcgatcacgta
tcgttcgagtacgaaaccgggcaaggggtgctgcacgacattacgctgacggtgcagcca
ggcgaaatcgtggcgctggtcggaccgagcggcgccggcaagagcacgctgttcaacctg
atcccacgtttctacgacccgacatccgggcgtgttctgatcgacggatacgacctgcgg
agcgtcacgcagcgcagtctgcgcgagcagatcggactggtgccgcaggaaacgatgctc
ttcggcggcacgatccgcgagaatatcgtctatggaaaattggacgccaacgaagaagac
atcatcgcggcagcaaaggctgcgaatgcgcacgatttcattatggcgatgccacgcggg
tacgacacgctggtcggcgagcgcggcatcaaactgagcggcgggcagcgccagcgcatt
gcgattgcgcgcgtgatgctgaagaacccgcgtatcctgctcctcgacgaagccacgagt
tcgctcgacagcgaatcggaggcgctggtgcaagaagcgttcgagcgcctgatgcgcggg
cgcacttcggtcattattgcgcatcgtctcagcaccgtgtcgattgcccaccggatcatc
gtgctcaaccatgggcgcatcgttgagcagggaacccacgaggaactgctggcgcagcag
ggattgtatgcgcgtctctatgccttgcaattccgcgaaggcgtaacggtggggtag
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