Entry |
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Name |
(GenBank) Parallel beta-helix repeat
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Organism |
rca Roseiflexus castenholzii
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(4889426..4894894)
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AA seq |
1822 aa
MTRAYRLLFVLALLAFSVVAPAPSALAATFTVNSTADDPDASPGNGVCQTAGGQCTLRAA
IQEANALAGPHTIAFNIPTAAPGYDAAGFWRIRPASALPGITAGNVTIDGRTQPAGNPSW
THPRIVIDGSLITGGANGLTITSSGNTIRRLTIQNFATSASDLLGITGIGIFIRDPGATN
NRIHGCYLGTSPDGSSAAANRLAGVQIRNAGNNIIGNPTAGAGPDIDTAGDNALGNLISG
NGQTLLIAANVYLTASSYDDGRGNVIRGNLIGTNLAGNAKIGSDPGNQRYGVLLYQYLDD
TIIDANVISGHDAVPNPYGIYVFGDSAASSPTDTVISGNVIGTTKGGTSTTRVPNGVGIY
IGSASNTLIGGATPAARNIIAGNGVTSPNGHGVQLSSSRVSGTTIQGNYIGLNANGASFG
RSGTDSLGNLGHGIFVETNARQTTIRDNVISNNFGNGIRLSSDGSVVVGNRIGVNTASPP
ISDDTFANGQASIWISRGTTSSASPGNRIGGTNPGDANVIAYGLGSTPVAVQIRSDGTPN
TSNNEVIGNFIGVAPTGDALRGSPSTSSIGVYVVGASSLRADNNRIIGNTIGGLGTGIQI
ESSFTTGNEVSANTIGLAGAGNRYGVWLFQTSGHTIGGAGGVGVNATRNIIANNTLHGVL
VGMNSNGNTLLRNLARNNGGASGGHGVMVDATVSQVRISGTETSENNGKGINRAGSPPQP
PTIVGITGGSPPTLQVQVPAGANCGASGCRVEVFTSPTRDDAEGPRYLAFLDGAAAGATV
NVPVPDCDRFFSATVTDQTNNTSEFTPTMFEAPFSCQTDFILAQTGRTPPGSGPVNPGTI
VTYTYTVTNTGASPIVVTISRTDSTGWASTPSPATLNLNAGASGTFTISVAVPSNALAGN
YTFSVTAQVGATQRTLNTTTTVAQVYGVAIAPTSQTATFARPQVITFTHAITNTGNGPDT
IVVTAAVSPNDGATVSVIGGNCVSLAAFSSCTRQVQLTIPVGPGASLYTVTVTVSSSGNP
AIQATATDTASAGAVPQIAPASQLKEGLPGETVTFTHTVTNIGQSDGTFTPSLTLSQGSP
WSGSLTDPSSFTLNPNDSRVVTLTVTVPNTPIPDAGTLVTATLTVQASGGASAAAASITR
VGLVPGFTLSAATVPTLNLPPGATAVFTHTLTNTGNGLDTFVVTATLSSGLENLTVTPSG
PFSLARGASQQVVVQARVRDGQAVGTEQIQVTGARVGGGVPSQTQTDTVNVQAAPGVRLS
PGQTENITPPGSVTFTHVLTNVGNVAGNFSVSASGLPAGWSVAGPTNLFPANCLTGLAAG
ATCRFDLTVTTPLQLPQVPAGVYPFQVQASTTSVSDAVTDTVNVLAVPQFAFTADESGSG
APDTVITFTHRLTNTGNVTDTYTFSIAVSGGGFSADPPATVAAVPPGEGRLVPFAVRIPP
AAPAGTTGVITLMATSAQGAPSQSVSDTVTVNEADNARLEVVGPAQQTVFTSGAPAVAIY
TLNLFNTGNTTISYTLRLNPASLTGGWTAGVAPTLTAVLPPSATAPTPLTVQVSVPADVV
GTQAVTVEALRGDGAGPVLAAETLTTTAQLIATGDLLTPPENQGFGLPGETVVYTHTLRN
VRSVADTFVFSALVPLGYEVTLPPATFLSPGEEREVSVSIRIPSGVFSNTVDAMRLSVQS
VSDPNVAADAREYTTIRQVVSAVMSPEYVRVVQAGDQVQLTHQLLNTGNTTDTFVLTFTQ
TLPWNVVLRPSLRTLGPNQQAPFITLDVSVPANAPSGSVNRIRVRAQSQSDPTKVFEVEN
LFVIPVALPQVTYEVYLPLVKR |
NT seq |
5469 nt +upstreamnt +downstreamnt
ttgacgcgcgcataccgtctgctcttcgttcttgcgctgctggcgttctccgtcgttgcg
ccggcgccgtcggcgctggcggcgaccttcacggtcaatagcactgccgatgatcccgat
gccagccccggcaatggcgtctgccagacggcgggaggtcagtgtacgctgcgcgcggcg
atccaggaagccaatgcgctggcgggaccccataccattgcgttcaatattccgactgcc
gcgccaggttatgacgcagccgggttctggcgcatccggccagcaagtgcgctgccgggc
atcaccgccggaaatgtgaccatcgatggcagaacgcaaccggcaggaaacccctcctgg
acacatccgcgcatcgtcatcgatggttcgttgatcaccggcggcgcgaatggtctgacg
atcacgtcgtcggggaacaccatccgtcgcctgacgatccagaactttgcgacctctgca
tccgatcttctggggataaccggcatcggcattttcatccgcgatccaggcgcaaccaac
aatcgcattcatggatgctacctgggcacgtcgccggacggcagcagcgccgcagcgaac
cgtctcgccggggtgcagatccgcaatgcagggaacaatatcatcggcaacccgacggcg
ggcgccggtcccgatatcgacacggccggcgataatgcgctcggcaacctgatctccggc
aatggtcagactttgctcattgccgcaaatgtctacctgaccgcttcgtcttatgacgat
gggcgcggcaatgtgatccgcggcaacctgatcggcacgaacctggcgggcaacgccaag
attggcagcgatccgggcaatcagcggtatggcgtgctgctgtaccagtacctggacgat
accatcatcgatgccaacgtcatttccgggcacgatgccgtgcctaacccttacggcatc
tacgtatttggcgacagcgctgcgagcagtccgaccgatacggtgatcagcggcaatgtg
atcggtacgacaaaggggggaacctcaacgacccgcgtccccaatggcgtcggcatctac
atcggcagtgcaagcaacacgctgatcggcggcgcgaccccggcggcgcgcaatatcatc
gcgggcaatggcgtcacgtcgccgaatggccatggcgttcaactgagttcgagcagggtt
tctggcacaaccattcagggcaactatatcggtttgaatgccaatggcgcttcgttcggg
cgcagcggaaccgactcgctgggcaacctggggcatggcatctttgtcgagaccaatgcg
cgccagacgaccatccgcgacaatgtgatctcgaacaatttcgggaacggcattcgcctg
tcgagcgatggttcggtcgttgtcggcaatcgcatcggggtcaacactgcgtcgccgccg
atctccgacgatacctttgcgaatggtcaggcgagcatctggatcagccgcggcacaacg
tccagcgcgtcgccggggaaccggatcggcggcacgaatccaggcgatgccaatgttatc
gcttatgggctgggatcgacgccggttgcggtccagattcgctccgatggcacgccaaat
acatcgaacaatgaggtcatcggtaattttatcggtgtggcgccgacgggcgatgccttg
cgtggcagtccatcaacaagttcgattggcgtatacgtcgttggcgccagctcgttgcgc
gccgacaacaatcgcattatcggcaacaccattggcggattgggcacaggcatccagata
gagtcatcgtttacaaccggcaatgaggtcagcgccaatacgattggtcttgccggcgcc
ggcaaccgatatggcgtctggctgtttcagacgagcggccataccatcggtggcgccggt
ggcgtcggcgtgaatgccacacgcaacatcattgccaacaataccctgcacggcgttttg
gtgggcatgaattcgaacggcaacacattgttgcgcaacctggcgcgcaacaatggcggc
gcatccggcgggcacggggtgatggtcgacgcgactgtcagccaagtgcgtatctctggg
acggaaacgagcgagaacaacgggaaggggatcaaccgcgccggcagcccgccgcaaccg
ccgacaattgtcggcattaccggcggcagcccgccaacccttcaggtgcaggttccggcc
ggcgccaactgtggcgccagcgggtgccgcgtcgaggtgtttaccagccccacccgcgac
gacgccgaaggtccgcgctatctggcattcctcgacggcgccgcagccggcgctacggtc
aatgtgcctgtgcccgactgcgaccgcttcttctcggcgacggtgaccgatcagaccaac
aatacctcggaatttacgccgacgatgttcgaggcgccgttcagttgtcagaccgacttc
atccttgcgcagaccggacgcactccgccgggaagcggaccggtcaatccgggcacgatt
gtgacttacacctatacggtgacgaacaccggcgcctcgccgattgtggttaccatctcg
cgcaccgactcaaccggttgggcgtcgacgccgtcgccggcgaccctcaatctgaatgcc
ggggcgtcggggacgttcacgatctctgtcgcagtgccctcgaatgcgctggcgggaaat
tacaccttcagcgtgacggcgcaggttggcgcgacgcagcgcacgctcaacaccaccaca
acggtggcgcaggtgtatggtgtggcgattgcgccgaccagccagaccgctacgttcgcc
cgaccgcaggtgattacatttacccatgcgatcaccaataccggcaatggaccggatacg
attgtggtcacagccgcagtgtcgccgaatgatggcgcgacggtcagcgtcataggcggg
aattgtgtcagtctggcggcattctcgtcgtgtacgcggcaggttcagttgaccatccct
gtcggtcctggcgcgtcgctctacacggtgacggtcactgtgagttcgagtggcaatccg
gcgattcaggcgacggcgaccgatacggcgtcggcgggcgctgtgccgcagatcgccccc
gcttcgcaactgaaggaaggattgcccggcgagacggtcacgttcacgcacacggtgacg
aacatcggtcagagtgacggaaccttcacaccgtcgctcacgctgtcgcagggcagcccg
tggagtggaagcctgaccgatccgtcgtccttcactctgaaccccaacgactcgcgagtg
gtcacactgaccgtgactgtgccgaacacgccgattcccgatgcgggcacgctggtcacg
gcgaccctgacggtgcaggcaagcggtggggcatcagcggcggctgcgagcatcacgcgc
gttgggctggttccaggctttaccctgagtgcagcgaccgtgccgacgctcaatctgccg
ccgggcgctacggcagtctttacccacacgttgaccaataccggcaatgggttggataca
ttcgtggtgacagcgacgttgagcagcggtctggaaaacctgacggtgacgccgtccggt
ccgttctcgttggcgcgcggcgcatcgcagcaggtggtggtgcaggcgcgggtgcgcgat
gggcaggcggtcggaactgaacagattcaagtgactggtgcgcgtgttgggggtggtgta
ccgtcgcaaacgcagacggatacggtgaacgtgcaggcggcgccgggagtgcgcctctct
cccggtcagacggagaatatcacgccgccaggaagcgtgacctttacccacgtgttgacg
aacgttggcaacgtggcgggcaacttcagcgtgagtgcgagcggtctgccggctggctgg
agcgtcgccggtccgacgaacctgtttccggcgaactgcctgacgggtctggcggctggc
gcgacgtgtcgcttcgatctgacagtcaccacgccgttgcagttgccgcaggttccggcg
ggcgtctatccattccaggtgcaggcgagcactaccagcgtatcggatgccgtgaccgat
acggtgaatgtcctggctgtcccgcagtttgcgttcacggcggatgagagtggcagcggc
gcgcccgacacggtgataaccttcacgcatcgactgacgaacaccggcaacgtgaccgac
acctacaccttcagcatagcggtgagcggcggcggtttcagcgccgacccgccggcgacg
gttgccgctgtgccgccaggagaggggcggcttgtgccgtttgcagtgcgcattccgccg
gctgcacctgccggaacgaccggtgtcatcacgctgatggcgacctcggcgcagggtgcg
ccatcgcagagcgtcagcgatacggtgaccgtcaatgaagccgacaacgcgcgcctcgaa
gtggtcggtccggcgcagcagacggtgtttacgagcggtgcgccagcggttgcaatctac
acgctgaatctgttcaataccggcaacacgacgatcagttacaccctgcgcctgaacccg
gcgagcctgaccggtggatggactgctggcgtcgcgccgacactcacagcggtactgccg
ccgagcgcaacggcgccgacgccgctaaccgtgcaggtcagcgtgcccgccgatgttgtc
ggaacgcaggcggtgacggtcgaggcgttgcgcggcgatggcgccggtccggtgctggcg
gcggagacgctcaccacaactgcgcagttgatcgcaaccggcgatctgctgacgccgccg
gagaatcaggggtttggtctgcctggcgaaacggtggtctatacccacacgctgcgcaat
gtgcgttcggtggcggatacgtttgtcttcagcgcgctcgttccgctgggatatgaggtg
actctgccgcctgcgacgttcctgtcgcctggtgaagagcgcgaggtcagtgtcagtatt
cgcattccaagcggcgtcttctccaataccgtcgatgcgatgcgcctgagcgtgcagtcg
gtctccgacccgaatgtggcagcggatgcacgcgagtatacaaccattcgccaggtggtg
agtgcggtcatgtcgcccgaatatgtccgcgtcgtgcaggcaggggatcaggtgcagttg
acccatcagttgctcaacaccggcaatacgactgacacctttgtgctgaccttcactcaa
acgctgccgtggaatgtcgtgctgcgaccctcgctgcgcacgctgggaccgaaccagcag
gcgccgttcattacgctggatgtgagcgtaccggcaaatgcgccgtcgggatcggtcaac
cgcatccgggtgcgggcgcaatcgcagagcgatccgacgaaggtgttcgaggtcgagaac
ctgttcgtcattccggtggcgctgccgcaagtgacgtatgaggtctatctgccgctggtg
aagcgatga |