Roseiflexus castenholzii: Rcas_3845
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Entry
Rcas_3845 CDS
T00585
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_3845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_3845
Transporters [BR:
rca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rcas_3845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
ABU59882
UniProt:
A7NQN6
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All DBs
Position
5026004..5027698
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AA seq
564 aa
AA seq
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MALRDLFVRPSSILMVLLIAGSLILAACGATPQQSAPVPTQAGAAPPPTSVPATPADARP
QATGRTRLVFFGNLEPASIDVITMSGNVNERQVAAQIFETLVYMDQSQQIYPGLAREWSR
SDDATTWTFKLVSGVKWHDGTPFTAQSVADYFDYIRDNPVGSGPGSLKAVIGSAKAVDET
TVELTLTAPRPDLLIELADPGMGIGNAAYLKRVGADAGFNPVGTGPFKFKEWVRGSQIVL
ERNPEWTWGSPLFKMSGPPLIEEVVFRFSSEAQTRLAALEAGEVDFVDLLPFQDVVRVRT
DPRFTVTGVLLPGMPQMNYLNTSLAPTDDINVRKAIIYATDKQGIIESVYFNMVEPAYGP
LSRVFPEYEPALEQMYEYNPEKAAQLLEEAGWLPGPDGVRVKDGRRLEVTIVENKGWNDW
VYVLQANLQAIGFDAKVLTTQGPSNTEAIASGKYHVPAMGDVFASASQMTRDWHSEGYGT
FPSGHFLKGEDGARLDRMLKEAETEIDPEKRIEKYREIQKFIMEQALMVPIFELYFYVAH
ANNLKGFVVDGTGFYKYFAPAYFE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgcgatttatttgtccgtccatcatcgattctgatggtcctgctgatcgct
ggctcgttgattctggctgcatgcggcgcaacgccgcagcagagcgctcctgttcccact
caggcgggcgccgcaccgccgccgacatcggttcctgccacccctgccgacgccagacca
caggcgaccggtcggacgcgcctggttttcttcggcaatctggaaccagccagtatcgat
gtcatcacaatgtcgggcaacgtcaatgaacgtcaggtcgccgcacagattttcgaaacg
ctggtgtacatggatcagagccagcagatataccccggtctggcgcgcgaatggagccgt
tccgatgatgcgacgacgtggacgttcaagttggtttcgggagtaaaatggcacgacggc
acgccgttcacggctcaatcggtggcggactatttcgactacattcgcgataatcccgtc
ggaagcggacctggatcgctcaaagccgtaatcggcagcgccaaagcagtcgatgaaacg
acggtcgaactcacgctcactgcgccgcgtcccgatttgctgattgagcttgcggatccg
gggatgggcattggaaatgccgcctacctgaaacgggtgggcgccgatgccggtttcaat
ccggtgggaaccggtccattcaagttcaaggaatgggtgcgcggcagccagatcgtgctg
gagcgcaaccctgaatggacctgggggtcacccttgttcaagatgagcggtcctcctttg
atcgaagaagtggtctttcgcttttcttctgaagcgcaaacacgacttgcagcgctggaa
gccggcgaagtcgatttcgttgaccttctgccattccaggatgtcgtgcgtgtccgcacc
gatccgcgctttaccgtcaccggcgtgctgctaccgggcatgccgcaaatgaactatctc
aacaccagcctggcgccgaccgatgacataaatgtgcgcaaagcgattatctatgccacg
gacaagcaaggtatcatcgagagcgtttatttcaacatggtcgaaccggcatacggaccg
ctgtcgcgcgtcttcccagagtacgaaccggcgctggagcagatgtacgagtacaatcct
gagaaagccgcgcaattgctcgaagaagccggctggcttcccggtcccgacggcgttcgt
gtcaaggacggtcggcgccttgaagtgacgatcgttgagaataaaggctggaacgattgg
gtctatgtgctgcaagccaatctccaggctatcggctttgacgcaaaagtgctcaccacc
cagggcccgtcgaatacggaagcgattgccagcggcaaataccacgttccggctatggga
gacgttttcgcttctgccagccagatgacccgtgactggcactcagaggggtacggaacc
tttccttccggtcattttctgaaaggcgaagacggcgccagattggacaggatgctgaaa
gaggcggagacggagatcgacccggaaaaacgcatcgaaaagtatcgtgagattcagaag
ttcatcatggagcaagcgttgatggtgccgatcttcgaactgtacttctatgtcgcccac
gcgaacaatctgaaaggcttcgtcgtcgatggcacgggtttctacaagtactttgcgcca
gcgtactttgagtaa
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