Roseiflexus castenholzii: Rcas_3933
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Entry
Rcas_3933 CDS
T00585
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03030
DNA replication
rca03430
Mismatch repair
rca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rcas_3933
03430 Mismatch repair
Rcas_3933
03440 Homologous recombination
Rcas_3933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rca03032
]
Rcas_3933
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_3933
Enzymes [BR:
rca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rcas_3933
DNA replication proteins [BR:
rca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rcas_3933
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rcas_3933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABU59966
UniProt:
A7NQX0
LinkDB
All DBs
Position
5131878..5132576
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AA seq
232 aa
AA seq
DB search
MFLFRRRPAHLPESVVAYLEAQRPDPALPWRAAPYSVMDVETTGLNPRRDALLAIGLVEI
DEGRIRMDRRWYTLVHPPDDAPINPESIRIHGLLPQDVEHAPPLDAVVPDVLRRLTGRVL
VVHVADVDIGFLRQAMRRLYGVDPRGPAIDTARLAWHFQRHQRLIEGLGSEQEPALQLRA
LAESLGLPVYPEHNAFNDALTTAQLFLAQVSMFEAQSTPRLRDLLRAGGCLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtttcgccgccgaccggctcatctccctgagtcggtcgttgcctatctcgag
gcgcagcgtcccgatccggcgctgccctggcgcgctgcgccctacagcgtcatggatgtc
gagaccaccggactgaacccgcgccgcgatgcgctgctggcaatcgggttggtggagatt
gacgaagggcgcattcgtatggatcggcgctggtacaccctcgttcatccgccggatgat
gctccgatcaacccggaatctattcgtatccatggtctgctgccgcaggacgtggagcat
gcgccgccgctcgatgcggtcgtccccgacgtgttacggcgattgaccggacgggtgctg
gtggtgcatgtggccgatgtggacatcggctttctgcgtcaggcaatgcggcggttgtac
ggcgttgatccgcgcggtcctgccatcgatacggcgcgcctggcgtggcattttcagcgc
catcagcgcctgatcgaaggattgggatcagagcaggaaccggcattgcaactgcgcgca
ctggcggaaagtctcggattgcccgtttaccccgaacacaacgccttcaacgatgctctg
acgacggcgcaactcttcctggctcaggtgagcatgttcgaggcgcagagcacgccgcgt
ctgcgcgatctcctgcgtgccggcggatgtttgcggtga
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