Roseiflexus castenholzii: Rcas_4093
Help
Entry
Rcas_4093 CDS
T00585
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_4093
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rcas_4093
Archaeal homologous recombinant proteins
Rcas_4093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Phage_scaffold
AAA_21
AAA_15
Rad50_zn_hook
zf-Di19
ABC_tran
HhH-GPD
Ty4_N
Motif
Other DBs
NCBI-ProteinID:
ABU60125
UniProt:
A7NRC9
LinkDB
All DBs
Position
complement(5303902..5306970)
Genome browser
AA seq
1022 aa
AA seq
DB search
MIPRTLTLQNFMCYREGLPPLVLDGISIACLAGDNGAGKSALLDAITWALWGEARLKSDD
DLVALGATEMMVDLEFTLDGQDYRVIRRRIRGKRGGQSQLDFQVRDENGWRSLTPGGIRE
TQQLIIRTLRMDYEVFANSAYLRQGHADEFTRKEPAKRKQVLADILGLSVYEDLESRAKE
RARAIEGQIRGLEGQIGELRRQAERRDVLVGFVRDAEQRVADARQRITEAEQAFQAAVAK
VQELETVRTIRDNRQEQIHQRRAERDAQKQWLDRQMDIRERAEGWIARRAEIEEGIRALR
AAEAERDRLAALRDEYDRLQQRRATLVQALAEAEHALRADLRVAETQVQTMRERAARRPK
LVAERERLAAQLTDQTPMIEALSAARTRRTDLTDRLRRVNELLRRRTELEGDIKLKHDSL
VATREEQKRILRTLADQLKHETRWRAELAEALAERTRINEEKDCLEILRNDERVLAEQVG
GIRAECETVRRQGEQINEKLRLLGPDVTVCPLCKSELGHDGIVHIQAEYERERQALRQWY
AAAKRDADQLEAQLKRLRNDIRAAENRIAALPDLQGRIARLESDLARCDTLRQQQIEAQR
LHDDVAMRLMKNDYELAAREELKRIDAEMTALGAIETLEREIGALDRQVAALENRSREQA
TLQAQVDALHREIRQIDDDDPALHEQEQIVAELSRRLAQNDFAHDERAALATLDEQIAAL
GYSRERYDQAKAEAQALTRWEEDLTRLQHAEEWIAENDDDIARAAERLRQLDAQIASDEA
EVQRLDERLRDLAPAARARDAARARLDDLHRELLAFQKDLGEHEANLRRAEEAARGLADA
EALRLALLERKSLFDELTLAFGKKGVQAMLIETALPELEREANRLLDRMTDNQLHLTFET
QRDTKKGDVVETLEIKIADALGTRVYDAYSGGEAFRLDFAIRIALSKLLARRAGARLETL
IIDEGFGSQDARGRERLVEAIISVQHDFRRVLVITHIQELKDMFPVQIEIVKTPHGSVWS
LA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcgaacgctgacactccagaacttcatgtgctaccgcgaagggttgccgccg
ctggtgctcgacggcatctcgattgcgtgtctggcgggtgacaatggcgccggcaaatcg
gcgctgctcgatgcgatcacctgggcattatggggtgaagcgcgtctgaagagcgacgat
gatctggtagcgcttggcgccaccgagatgatggtggacctggagttcaccctcgatggg
caggattatcgggtgatccgccgccgtatccgcggcaagcgcggcggtcagagccagctc
gacttccaggtgcgcgatgagaacggctggcgctcgctgaccccaggtggcattcgtgaa
acgcagcagttgatcatccgcacgctgcgcatggattatgaggtcttcgccaattcggcg
tatctccgccagggacacgccgatgagttcacccgcaaagaaccggcgaaacggaagcag
gtgctggcggatattcttggtttgagcgtgtatgaggacctggaaagtcgggcgaaggag
cgcgcgcgcgccatcgaagggcagatccgcggtctcgaaggtcagatcggcgaattgcgc
cgccaggcggaacgacgcgacgtgctcgtggggttcgtgcgcgacgctgaacagcgtgtc
gcagatgcgcggcagcgcatcacagaagcggaacaggcgttccaagcggcggttgccaaa
gtgcaggaactcgaaacagtgcgcactatccgcgataaccgtcaggagcagattcatcag
cgccgcgccgaaagggatgcgcagaagcagtggctggatcggcagatggacatccgggaa
cgcgctgagggctggattgcgcgccgtgccgagattgaggaaggcattcgcgcgctgcgc
gctgccgaagcagagcgtgatcgcctcgccgcgctgcgcgatgagtatgatcggcttcag
cagcgtcgcgcgaccctcgtgcaggcgcttgccgaagccgaacacgctctccgtgccgat
ctgcgcgttgctgagacgcaggtgcagacgatgcgcgaacgtgctgctcgccgcccgaaa
ctggtggcggaacgggagcgcctggcggcacagttgacggatcagacgccgatgatagag
gcgttgtcggctgcgcgcacccgccgtactgacctgaccgaccgcctccgtcgcgtcaat
gagctgctgcgccgccgcacggagctggaaggggatatcaaactgaaacacgactcgctg
gtcgccacgcgcgaggagcagaagcgaattctgcgcacgctggcagatcaactgaaacac
gaaacgcgctggcgcgccgaacttgccgaagcgctcgcggaacgcacccggatcaacgaa
gaaaaagactgccttgaaatactccgcaacgatgagcgcgtccttgccgagcaggttggc
ggcatccgcgctgaatgcgagacggttcgacgacagggtgagcagatcaacgaaaaacta
cgcttgcttggtcctgatgtgacggtgtgcccgctctgcaagagcgaactcggtcacgac
ggcattgtccacatccaggcggaatacgagcgtgagcgtcaggcgctgcgccagtggtat
gccgctgccaaacgcgatgccgatcagctcgaagcgcagctcaaacgcctgcgcaacgac
attcgtgctgccgagaaccgtattgctgcgcttcccgatcttcaggggcgcattgcgcgt
ctggaaagcgaccttgccagatgcgacacacttcgccagcaacagatcgaggcgcagcgc
ctgcatgatgatgtggcgatgcgcctgatgaagaacgattatgagttggcggcgcgcgaa
gagttgaagcgcatcgatgccgagatgacggcgcttggcgccatcgagacgctcgaacgt
gaaatcggcgcgcttgatcgccaggttgccgccctcgagaatcgcagccgcgaacaggcg
acgcttcaggcgcaggtcgatgcgctgcaccgtgaaatccggcagatcgacgacgacgac
ccggcgttgcacgaacaggagcagattgtcgcggaattgagcagacgcctggcgcagaac
gattttgcgcacgacgagcgcgcagcgcttgccacgctcgacgagcagattgcggcgttg
gggtatagccgcgaacggtatgatcaggcgaaggctgaggcacaggcgttgactcgttgg
gaggaagacctgacgcgcctgcaacacgctgaagagtggattgccgagaacgacgatgac
atcgcgcgcgcggcggagcgcctccggcaacttgacgcgcagatcgcctccgacgaagcc
gaggtgcaacgcctcgatgaacgcctgcgcgacctggcgcccgccgcgcgcgcgcgcgac
gccgccagagccaggctcgacgacctccaccgcgaattgctggcgttccagaaggacctt
ggcgaacacgaggcgaacctgcgccgcgctgaggaagctgcgcgcggcctcgctgatgcc
gaagcgctccgcctggcgcttctcgaacggaaaagtctgttcgatgaattgaccctggcg
tttggcaaaaagggcgttcaggcgatgctgattgaaaccgctcttcccgaactggagcgt
gaagccaatcgcctcctcgaccggatgaccgataatcagttgcatctgacgttcgagacg
cagcgcgatacgaagaagggcgatgtcgtcgaaacgctggagatcaaaatcgctgatgcg
ctcggtacgcgcgtctacgacgcctatagcggtggtgaagcgttccgtctcgacttcgcc
atccggatcgcgctctcgaaactgctggcgcgccgcgctggcgcgcgcctcgagaccctg
atcatcgatgaagggttcggctcgcaggacgcgcgcggacgcgaacgcctggttgaggcg
atcatctcggttcagcacgactttcgccgtgtgctggtgatcacgcacattcaggaattg
aaggatatgtttcctgtgcagatcgaaattgtcaaaacgccgcacggcagcgtctggagt
ctcgcgtga
DBGET
integrated database retrieval system
