Roseiflexus castenholzii: Rcas_4249
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Entry
Rcas_4249 CDS
T00585
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_4249
Enzymes [BR:
rca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Rcas_4249
DNA repair and recombination proteins [BR:
rca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Rcas_4249
Prokaryotic type
Rcas_4249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABU60276
UniProt:
A7NRT0
LinkDB
All DBs
Position
complement(5491582..5492394)
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AA seq
270 aa
AA seq
DB search
MSTDMRRDFANRNELIEYLRREFPQAAARCDEVSATRGGRREAETRLRRIDPRRYAATRN
YLSGAVTHLSPYIRHGVLSLAEVRDAALSRVRRSADAAKLVSELGWRDYWQRLYERLGDN
VWRDQESYKTGYCAGDYAAELPDDIIEGRTGLACIDAFSHELRATGYLHNHARMWLAAYV
VHWRRIRWQAGARWFLEHLLDGDPASNNLSWQWVASTFSHKPYIFNRENLERFTDGVYCR
TCPLYGRCDFEGTYDALNRRLFPNATGTTG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgatatgcgccgtgatttcgccaaccgcaatgagttgatcgagtatctgcgc
cgcgagtttccgcaggcggcggcgcgctgtgacgaggtgagcgcgacccgtggcgggagg
cgggaggcggagacgcgcctgcgacgtatcgacccgcgtcgctacgccgccacgcgcaac
tacctgagtggtgcagtcacgcatctttcgccctacatccggcatggcgttctcagtctg
gcggaggtgcgcgatgcggcactcagccgggtgcgtcgctctgccgatgccgccaaactg
gtcagcgaactcggttggcgcgattactggcagcgcctctacgaacgcctcggtgacaat
gtctggcgtgaccaggagtcatacaagaccggttattgcgccggtgactacgccgccgaa
ctgccggacgacattatcgaagggcgcacggggctggcgtgcatcgacgcattcagccac
gaattgcgcgccaccggttacctgcacaaccacgcgcgcatgtggctggcggcgtatgtg
gtacactggcgacgtatcagatggcaggcgggcgcgcgctggtttcttgaacatctgctc
gacggcgacccggcgagtaacaatctgtcgtggcagtgggtggcgagcaccttcagccac
aagccgtacatcttcaaccgcgaaaacctggagcgcttcaccgatggcgtctactgccgc
acttgcccgctctacgggcgctgcgacttcgagggaacctacgatgcgctgaaccggcgc
ctctttccgaacgcaaccggtacgaccggataa
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