Roseiflexus castenholzii: Rcas_4411
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Entry
Rcas_4411 CDS
T00585
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_4411
Enzymes [BR:
rca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Rcas_4411
DNA repair and recombination proteins [BR:
rca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Rcas_4411
Prokaryotic type
Rcas_4411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABU60427
UniProt:
A7NS81
LinkDB
All DBs
Position
5663229..5664692
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AA seq
487 aa
AA seq
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MIWIHWFRRDLRLHDNPALHTASIRSDGRVIPLFILDDAILHAPRTGAARIAFMIAALRD
LDANLRARGSRLVIRRGRTLDVIRAMVQETGATGVAWNRDYTPFARRRDAQVEAALRDLN
VETSIAEDAVVFSPDDVRTGDGRPYTVYTPYRRRWRALTEQRRAEVLRAIEPPLLRPAPE
AVADQTVPDHADLGIVVSQRIPPGGETHGAARLAAFVDLAAAHSIAGYAEGRDLLAEPAT
SRLSPYLRFGCVAPRQALRAALRLLDIVGDDHRTVRSIETWIGELAWRDFYYQILWHYPH
VVRRSFKPQYDALAWENDPALFDAWKEGRTGYPIIDAAMHQLRQEAWMHNRARMIVASFL
TKDLLIDWRWGERYFMQQLVDGDHAANNGGWQWSAGTGTDAQPYFRIFNPVSQGQKFDPK
GLYVRRYLPELAQVPDRYIHAPWTMPRAEQQRCGVVIGRDYPAPIVDHAERRMRALALYR
AVSSVAL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatctggatccactggtttcgccgcgatctgcgtctgcacgacaatccagcgttgcac
accgccagcattcggagcgatgggcgagtcatcccgctcttcatccttgacgacgccatt
ctgcatgcgccacgcaccggcgccgcgcgtatcgcgttcatgatcgccgcactgcgcgat
ctcgacgccaacctgcgcgcgcgcggcagtcgcctggtgatccggcgtggacggacgctc
gacgtgatccgcgccatggtgcaggaaaccggcgccaccggcgttgcctggaaccgtgac
tacaccccgtttgcgcgacggcgcgatgcgcaggtcgaagcggcgctgcgtgatctgaac
gtcgagacctctattgcggaagacgcggtcgtcttcagtcccgacgacgtgcgtaccggc
gatggacgcccctatacggtgtacacgccttaccggcgacgctggcgcgcgctgacagaa
cagcggcgcgcggaggtgctgcgcgcgatcgagccgccgcttttgcgcccggcgcccgaa
gccgttgcagatcagacagttccagaccatgcagacctcggcatcgtggtttcccaacgc
attcctccaggcggcgaaacgcatggcgctgcgcgactggcggcatttgtcgatctggct
gccgcacacagcatcgcgggctacgcagaagggcgcgatctgctggcagaaccggcgacc
tcgcgcctgtcgccctacctgcggtttgggtgcgtggcgccgcggcaggcgctgcgcgca
gcgctgcgcctgctcgacatcgtcggcgatgatcaccgtaccgtccgatcgattgaaacc
tggatcggggaactcgcctggcgcgatttctactatcagattctatggcactacccgcat
gtggtgcgccgatcgttcaaaccgcagtacgatgcgctggcgtgggaaaacgacccggcg
ctgttcgacgcctggaaggaaggtcgcaccggctacccgatcattgatgctgctatgcac
cagttgcgtcaggaagcctggatgcacaaccgggcgcgcatgatcgtcgcttcgtttctg
acgaaagatctgttgatcgactggcgctggggcgaacgctactttatgcagcaactggtc
gatggcgatcacgccgccaataatggcggatggcagtggagcgccgggacaggcaccgat
gcacaaccctacttccgaatcttcaatccggtcagtcagggacaaaaattcgatccaaag
ggcttgtatgtgcgccgctatctgccagaactggcgcaggttccagaccgctacatccac
gcgccgtggacaatgccgcgcgcagaacagcaacggtgcggcgttgtcatcgggcgcgac
taccccgcgccgattgtcgatcatgcagaacgacgaatgcgcgcactggcgctctatcgc
gcagtatcgtcggttgcgctttag
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