Rouxiella chamberiensis: O1V66_04650
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Entry
O1V66_04650 CDS
T08677
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rcb
Rouxiella chamberiensis
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcb03016
]
O1V66_04650 (rnd)
Enzymes [BR:
rcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
O1V66_04650 (rnd)
Transfer RNA biogenesis [BR:
rcb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O1V66_04650 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
WAT01985
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All DBs
Position
978864..979985
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AA seq
373 aa
AA seq
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MNYQLIVSNEELAKVCQQAQQFSQIALDTEFVRTRTYYPQLGLIQLFDGETLTLIDPLPI
TAWQPFIELLTDKNVVKFLHAGSEDLEVFLNAFGVLPAPFIDSQILAAFSGRPLSCGFAR
LVAETTQIELDKSESRTDWMARPLTQKQCDYAAADVLYLLPLARQLEQETREAGWIDAAL
DECLALCRRRQEVLQPESAYLEIGNAWQLRPRQLAILQKLASWRLIQARQRDLAVNFVVR
EENLWQVARYQPHSLGELEALGLSGPEIRYHGRTLLALVVEGEAVDEADLPAPIPNLIDQ
PGYKKIFKEIKALIQTVSEETGLSVELLASRRQINQLLNWHWKLKIKEQEPELVSGWRGK
LLAERLAGVLEQA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcgttagcaatgaagaactggcaaaggtttgtcagcaggcgcaa
cagtttagccagattgcgctggacaccgaatttgtcagaacccgcacttactatccgcag
ttgggcttgatccagctctttgatggtgaaaccctcacgctgattgatcccttgccgatt
actgcctggcagccgtttatcgaattactgaccgataaaaacgtggtcaagtttctacat
gccggcagtgaagacctcgaagtgtttctcaatgcctttggcgtgttgcctgcgcccttt
atcgacagccagattctcgcggccttcagcggccgtccactgtcctgcggctttgcccgt
ctcgttgccgagacgacgcagatagagctggacaaaagcgagtcgcgcaccgactggatg
gcccgcccgttaacgcaaaaacagtgcgactatgccgccgccgacgtgctgtatctgctg
ccgctggcacgccagcttgaacaggaaacacgcgaagccggctggatagacgccgcgctc
gacgagtgtctggcgctgtgccgccgccgtcaggaggtattgcaacccgaatccgcctat
ctcgaaatcggcaatgcctggcagttacgtccccgccagcttgccattttgcagaaactg
gcgtcatggcgtcttatccaggcgcgccagcgggatctggccgtcaacttcgtggtgcgc
gaagagaatctgtggcaggttgcccgttatcagccgcattcactgggcgaactggaagcg
ctgggtctgagcggtcccgagattcgttatcacggccgtaccttgctggcgctggtggtt
gaaggcgaagcggttgacgaggccgatttgccggcacctatcccgaatcttatcgatcaa
ccgggttacaagaaaatcttcaaagagattaaggcactgattcaaacggtcagtgaagag
acgggactgagcgtggaactgctggcgtcgcgccgccagataaaccagctgttgaactgg
cactggaagctcaaaatcaaagagcaggaaccggaacttgtcagtggctggcgcggaaaa
ctgctggctgagcgtctcgctggggtgctcgagcaggcgtaa
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