Rouxiella chamberiensis: O1V66_14520
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Entry
O1V66_14520 CDS
T08677
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rcb
Rouxiella chamberiensis
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcb03021
]
O1V66_14520 (rapA)
Transcription machinery [BR:
rcb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
O1V66_14520 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WAT00187
LinkDB
All DBs
Position
3133629..3136526
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AA seq
965 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTIVAVDARMVTVLFPATGENRLYARNDSPITRVMFNPGDT
ISSHEGWQLKVEEVVEDKGLLTYVGTRLDTEEEGVTMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQREQFRLEFGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDDRYAESRH
DATNPFESEQLVICSLDFVRRNKQRLEELGEAEWDMLVVDEAHHLVWSEEAPSREYMVIE
QLSQTIPSVLLLTATPEQLGQESHFARLRLLDPDRFHDYEEFIEEQQQYQPVADAVTLLL
NKQPLTSDALALLGERVGNADVDNLLTAANKGDEDAAKKLVAMLMDRHGTSRVLFRNTRN
GVKGFPQRHLQSIKLPLPTQYQTAIKVSGIMGSKKSQEARALDMLYPEQIYQEFEGDNAT
WWNFDPRVEWLLGYLTANRDKKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSIIER
DRAAAYFASEEDGAQVLLCSEIGSEGRNFQFASKMVMFDLPFNPDLLEQRIGRLDRIGQQ
NDIEIMVPYLENTAQAILLRWFHEGLDAFEHTCPTGRTIYDGSYQALIGFLATPAEQEGL
DEFIVTCREQHDALKQQLEQGRDRLLEMHSNGGEPAQALATAIGEQDNDVNLVNFALNLF
DIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFISWEHPI
IRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELLYVVECQAPKHLQLTRFLPPTPVRM
LMDKNGTNLAAQVEFESFNRQLNAINRHNSSKLVNAVQQDVHAMLQQAEPLVAVEAQSLI
EAAKLEADQQLTQELERLKALKEVNPNIRDDELESVESNRQQVLNSLNDANWRLDAIRLV
VVSHQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacacttggtcaacgctggatcagcgatacggaaagcgaattaggtttaggt
actatcgtcgcggtcgatgcgcgtatggttaccgtgcttttccccgctactggtgaaaac
cgcctgtatgccagaaatgattcacccatcacccgcgtgatgtttaacccgggcgatacc
atcagcagtcatgagggatggcagctgaaagttgaagaagtcgttgaggacaaaggtctg
ctcacctacgtggggacacgtctggacaccgaggaagaaggtgtgacgatgcgcgaggtg
ctgctcgacagcaagctgactttcagcaaacctcaggaccgtctgtttgccggtcaaatc
gatcgcatggaccgtttcgccctgcgttttcgcgcgcgtaaatatcagcgtgaacagttc
cgtctggagttcggcggtctgcgcggtatgcgcgcgagcctgataccgcatcagctgcac
atcgcctatgaagtaggccagcgtcatgcgccacgcgttctgctggccgatgaagtgggt
ctgggcaaaaccatcgaagccgggatgattatccaccagcaactgctgtccggtcgcgcc
gaacgcgtgcttatcgtggtgcccgagacgctgcaacatcagtggctggtcgagatgctg
cgccgcttcaacctgcgtttctctctgtttgatgatgaccgttatgcggaatctcgccat
gacgcgaccaacccgttcgagtccgagcagctggttatctgttccctggacttcgtgcgc
cgcaacaagcagcgtctggaagagctgggcgaagccgagtgggacatgctggtcgtcgac
gaagcgcaccatctcgtatggagcgaagaagcgccaagccgcgaatacatggttatcgag
cagctttcgcaaactatcccgagcgtgctgctgctgaccgcgacccccgagcaactgggt
caggaaagccactttgcccgtctgcgcctgctggatcccgatcgtttccacgattacgaa
gaatttatcgaagaacagcagcaatatcagcctgtcgccgacgccgtgaccctgttgctc
aacaagcagccgctaacctcggacgccttggcgctgcttggcgagcgcgtgggcaatgcc
gacgtcgataatctgctgacggccgccaacaagggcgatgaagacgccgccaaaaaattg
gtcgcgatgctgatggaccgccacggcaccagccgcgtgctgttccgtaacacccgtaat
ggcgtaaaaggcttcccgcagcgccatttgcagtccatcaagctgccgctgcctacccag
taccagaccgccattaaggtttcgggcatcatgggcagcaagaagtcacaggaagcgcgc
gcgctggatatgctgtacccggagcaaatctatcaggaattcgaaggcgacaacgcgacc
tggtggaactttgaccctcgcgtcgagtggctgctgggctatctgaccgccaaccgcgac
aagaaagtgctggttatctgcgccaaggccgccacggcgttgcagctcgagcaggtattg
cgcgagcgtgaggctattcgtgccgccgtgttccacgaaggtctgtcgattatcgaacgc
gaccgcgccgccgcctactttgcttccgaagaagacggcgcgcaggtgctgctgtgttcc
gaaatcggctccgaaggccgcaacttccagtttgccagcaagatggtgatgttcgacctg
ccgttcaaccccgatctgcttgaacagcgtatcggccgtctggaccgtatcggccagcaa
aacgacatcgaaatcatggtgccttatctggaaaacaccgcgcaggccattcttctgcgt
tggttccatgaaggtctggacgcgttcgagcatacctgcccgaccggtcgcaccatttat
gacggcagctatcaggcgctgatcggtttcctcgccacgcctgccgagcaggaaggcctc
gacgaatttatcgtgacctgtcgcgaacagcacgatgcgctgaagcagcagctcgagcag
ggccgtgaccgcctgcttgaaatgcactccaacggcggcgaaccggcgcaggcgctggca
accgcgattggcgaacaagacaacgacgtcaatctggtgaacttcgcactcaacctgttt
gatatcgtgggtatcaatcaggaagaccgcagtgacaacctgatcgttctgacaccatct
gaccacatgctggtaccggatttccccggcctgccgcaggatggctgtaccgtcaccttc
gaccgcgaacaggcgctgtcgcgtgaagacgcgcagtttatcagctgggaacacccgatt
attcgcaacggtctggatctcatcctttccggcgatacgggtagctgtgccgtgtcgatc
ctgaaaaacaaggcgttgccggtcggtacgctgctggttgaactgctgtatgtggtggag
tgtcaggcgccgaagcatctgcaactgacccgcttcctgccgccaacgccggtgcgtatg
ctgatggataaaaatggcaccaatctggcggcgcaggtcgagttcgaaagcttcaaccgt
cagttgaacgccatcaaccgccataactccagcaaactggtcaatgccgtgcagcaagac
gttcacgcgatgctgcaacaggccgaaccgctggtcgcggtggaagcgcagtcgcttatc
gaagcggccaagctcgaagccgatcagcagttgacgcaggaactggaacgcctgaaagcg
ttgaaagaggtcaacccgaatattcgtgatgacgagctggagtcggtggaatcaaaccgt
cagcaggtactcaacagcctgaatgatgcgaactggcgtctcgatgccattcgtctggtc
gtggtgagccatcaatga
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