Rouxiella chamberiensis: O1V66_16240
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Entry
O1V66_16240 CDS
T08677
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rcb
Rouxiella chamberiensis
Pathway
rcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O1V66_16240 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcb03019
]
O1V66_16240 (recQ)
03400 DNA repair and recombination proteins [BR:
rcb03400
]
O1V66_16240 (recQ)
Enzymes [BR:
rcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O1V66_16240 (recQ)
Messenger RNA biogenesis [BR:
rcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O1V66_16240 (recQ)
DNA repair and recombination proteins [BR:
rcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O1V66_16240 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WAT00453
UniProt:
A0ABY7HM52
LinkDB
All DBs
Position
complement(3500454..3502286)
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AA seq
610 aa
AA seq
DB search
MSTAAVIDKEVLAEQVLRDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIP
ALVMEGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRSGRIKMLY
IAPERLTMGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLVQVSSFDRPNIRYTLVEKFKPLDQLLRFVQDQRGKSGI
IYCGSRAKVEDTAARLQSRGISVGAYHAGLDNETRSRVQDAFQRDDVQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLDEKPPGPQ
QDVERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQEACGNCDICLDPPKRYDGLMDAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIREYGHDKLPIYGMGREQSNEHWISVVRQLIHLG
LITQNIAMHSALQLTEAARPVLRGEIAMQLAVPRLQTLKIRGSNTQKTYGGNYDRKLFAK
LRKLRKSLADEGNVPPYVVFNDTSLLEMAEQLPVSPGEMLNITGVGQRKLEKFGRPFMTL
IRDHIDNDDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacggcggcagtaatagataaagaagtgctggcagaacaggtactgcgcgatacc
ttcggctaccagcagttccgacccggtcagcaaacgatcatcaacacggccatctctggt
agagactgcctggtggtgatgccaacaggcggcggcaagtcgctgtgttatcagatacct
gccctggtcatggaaggcctgacgctggtggtttctccgcttatctccctgatgaaagat
caggtcgatcagctgatggccgccggtgtcgaagccggttgcctgaactctacccaaacc
cgcgagcagcaactcgaggtgatggccggctgtcgtagcgggcgcatcaagatgctctac
atcgcgcccgaacgtttgacgatgggcgatttcctggagcagcttcagcagtggaatccg
gcgatgctggcggtcgacgaagcccactgtatttcgcagtggggtcacgacttccgcccg
gaataccgcgcgctgggtcagctgaaactgcgctatccgcagttgccggtgattgccctg
accgcaaccgccgacgaagccacccgcaacgacatcgtccgcctgctcgaactcaatgac
ccgctggtgcaggtcagcagttttgaccgccccaatattcgctacacgctggtcgaaaag
ttcaaaccgctggatcaactgctgcgctttgttcaggatcagcgcggcaagagcggcatc
atttattgcggtagtcgcgccaaagtggaagacaccgccgcgcgcctgcaaagtcgcggc
atcagtgtgggcgcttaccacgccggtctggacaacgaaacccgttcgcgcgtgcaggac
gccttccagcgcgacgacgtgcagatagtggtcgcaaccgtcgccttcggcatgggcatc
aacaagcccaacgtgcgctttgtggtgcacttcgatatccctcgcaacatcgagtcctac
tatcaggaaaccggtcgcgccggacgtgacggcctgcccgccgaagcgctgctgctctac
gacccggccgatatggcctggctgcgccgctgtctggacgaaaaaccgcccggcccgcag
caggacgtcgaacgccacaaactcaacgcaatgggcgcgtttgccgaagcgcagacctgt
cgccgtctggtgttgctcaactactttggcgaaggcaagcaggaagcgtgcggcaactgc
gatatctgtctcgatccgccgaaacgctacgacggcctgatggacgcgcagaaagcgctg
tcgtgcgtttaccgcgtcgggcaacgttttggtctgggttatatcgtcgaagtgctgcgc
ggtgccaataaccagcgaattcgcgagtacggccacgacaagctgccgatttacggcatg
ggacgcgagcagagcaacgaacactggataagcgtggtgcgccagcttattcacctcggc
ctgattacccagaatatcgccatgcactccgcgctccagctgaccgaggccgcaagaccg
gtgctgcgcggcgaaattgcaatgcagctcgcggtgccgcgtctgcaaacgctcaagatt
cgcggcagcaatacgcagaaaacctacggcggcaactacgatcgcaagctgtttgccaag
ttgcgcaaactgcgcaaatcgcttgccgacgagggcaacgttccgccttacgtggtgttc
aacgacacctccctgctggagatggcggagcaactgccggtcagtccgggcgaaatgctg
aatatcaccggcgtcggacagcgcaaactcgagaaatttggtcgcccgtttatgacattg
atccgcgatcacatcgataacgacgatgaatag
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