Rouxiella chamberiensis: O1V66_19660
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Entry
O1V66_19660 CDS
T08677
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rcb
Rouxiella chamberiensis
Pathway
rcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O1V66_19660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcb03019
]
O1V66_19660
03009 Ribosome biogenesis [BR:
rcb03009
]
O1V66_19660
Enzymes [BR:
rcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O1V66_19660
Messenger RNA biogenesis [BR:
rcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O1V66_19660
Ribosome biogenesis [BR:
rcb03009
]
Prokaryotic type
rRNA helicases
O1V66_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
DRTGG
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WAT00966
UniProt:
A0ABY7HNL8
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All DBs
Position
4205269..4207188
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AA seq
639 aa
AA seq
DB search
MTTELETSFADLGLSAPIISALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPA
EHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPTAEVLGQRRLAKFAAKVQQQLESSDLDQYRALLAKLQPAEELDVE
TLAAALLKMAQGERPLIVAADPVFKSRPPRREFEDRGDRPSRGDRPVRGDRPSRDGDRPA
RDGAPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTI
ELPKGMPGEILSHFTRTRILNKPMNMQLMGDAVPQSDRRERPAGGDRRGNGAPRSFSGER
REGGAGRGRPFNGDRRDGGNSAAGERRPPSRAPRRTTDA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgacctggggctgtctgctcctatcatttct
gccctgaacgatctgggctacgaaaaaccatcaccgatccaggccgagtgtattcctcac
ctgttgaacggtcgcgatgttctgggtatggcccagaccggtagtggtaaaactgcagcc
ttctcgctgccactgttgcacaacattgatgcttccctgaaagcaccacaaattctcgtt
ttggccccgacccgcgaactggcggttcaggttgccgaagccatgaccgatttctccaag
cacatgcacggcgtgaacgttgttgcattgtacggcggccagcgttatgacgtgcagctg
cgcgctctgcgtcagggtccacaggttgttgtgggtactccgggccgtctgctggaccac
ctgaaacgcggtactctgaacctctccaacctgagcggtctggtactggacgaagccgat
gaaatgctgcgtatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggct
gaacatcagaccgcgctgttctctgcaaccatgccggaagcgattcgtcgcattactcgt
cgcttcatgaaagatccgcaggaagtgcgtatccagtcaagcgtaaccactcgtccggac
atcagccagagctactggtctgtatacggtatgcgcaagaacgaagcgctggttcgcttc
ctggaagcggaagactttgacgcagccatcatctttgttcgcacgaagaatgcgaccctg
gaagtggccgaagcgctggagcgtagcggttacagctctgctgcattgaacggcgacatg
aaccaggccctgcgcgagcagactctggaacgtctgaaagacggccgtctggatattctg
attgcaaccgacgtggcagcacgtggtctggacgttgaacgtatcagcctggtggtaaac
tacgatatccctatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgct
ggccgtgcgggtcgcgcgctgctgttcgtcgagaaccgcgaacgtcgtctgctgcgcaac
gtagaacgcaccatgaagctgaccattccagaagtggaattgccaactgcagaagtgctg
ggtcaacgtcgtctggccaagtttgccgctaaagttcagcagcagcttgaaagcagcgat
cttgatcaataccgtgcgctgctggctaaacttcagcctgccgaagagctggacgttgaa
actctggctgccgcactgctgaaaatggctcagggcgaacgtcctctgatcgttgctgca
gatccagtattcaagagccgtccaccgcgtcgtgaattcgaagaccgtggtgaccgtcct
tcacgtggcgaccgtcctgttcgcggtgatcgtccttcacgtgatggcgatcgtccagcg
cgtgatggcgctccacgtcgtgaacgtcgtgacgctggcgagatggaactgtaccgcatt
gaagttggccgtgatgacggtgtcgaagttcgtcacatcgttggcgctatcgccaacgaa
ggcgatatcagcagccgttacatcggtaacatcaagctgttcggtacccactcaactatc
gagctgcctaaaggtatgccgggcgagatcctgtctcacttcacccgtacccgcatcctg
aacaagccgatgaacatgcagttgatgggcgatgcagtgccacagtccgaccgtcgtgaa
cgtccggccggtggtgatcgtcgtggtaacggtgcgccgcgctctttcagcggtgaacgt
cgtgaaggtggtgcaggccgtggccgtccattcaacggcgaccgtcgtgacgggggtaac
tctgcagccggcgaacgtcgtccgccaagccgcgcaccacgtcgcacaactgacgcataa
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