Rouxiella chamberiensis: O1V66_21005
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Entry
O1V66_21005 CDS
T08677
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rcb
Rouxiella chamberiensis
Brite
KEGG Orthology (KO) [BR:
rcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcb03036
]
O1V66_21005 (xerD)
Chromosome and associated proteins [BR:
rcb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
O1V66_21005 (xerD)
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_M
SH2_1
Motif
Other DBs
NCBI-ProteinID:
WAT03166
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Position
4479591..4480472
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AA seq
293 aa
AA seq
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MLVEQFLDALWLERNLAENTLASYRLDLKTLLAWLGHHQTDLIHVQAPELQSFLAERVEG
GYKATSSARLLSAMRRLFQYLNRESLREDDPTALLSSPKLPQRLPKDLSEAQIESLLAAP
STEIPLELRDKAMLELLYATGLRVTELVGLTLSDISLRQGVVRVIGKGDKERLVPLGEEA
VYWLEYYLEHGRPWLLNGQSLDVVFPSSRSQQMTRQTFWHRIKHYAVLAGINADKLSPHV
LRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgaacagtttctcgatgcgctgtggctggaaagaaacctcgccgaaaacact
ctggcttcctatcgtctcgacctgaaaacgctgttggcgtggcttgggcatcatcaaacc
gacctgattcatgttcaggcaccggagttgcagtcttttctcgccgagcgagttgaaggg
ggctacaaggcgaccagttcggcgcgtctgttgagtgccatgcgtcggttgtttcagtac
ctgaatcgagaatcgctgcgtgaagacgatcctaccgcgctgctctcctcgccgaagctg
ccacaacgactgccgaaagacttgagcgaggcgcagatagagtcgttgctggccgcgccc
agcacggaaattccgcttgagcttagggacaaggcgatgcttgagctgctttatgccacg
ggtctgcgcgttaccgagctggtcggactcacgctgagcgacatcagcctgcgacagggc
gtggtgcgggtgattggtaaaggcgataaagaacgcctcgtaccgcttggcgaagaggcc
gtttactggcttgagtattatctcgaacatggcaggccgtggctgctcaacgggcagtcg
cttgacgtcgttttcccgagcagtcgcagccagcaaatgacgcggcagacgttttggcac
cgtatcaagcattacgccgtactggcgggtatcaatgccgacaaactctcgccccacgtg
ctgcgccacgcatttgcgacacatcttttgaaccacggggccgacctgcgtgtcgtacag
atgcttttggggcacagcgacctgtcgaccacccagatttacacgcatgtcgcgacggag
cgtttaaagcagctacatcaacaacatcaccctcgtgcttga
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