Rickettsia canadensis CA410: RCA_00860
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Entry
RCA_00860 CDS
T01736
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc03030
DNA replication
rcc03430
Mismatch repair
rcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCA_00860 (holA)
03430 Mismatch repair
RCA_00860 (holA)
03440 Homologous recombination
RCA_00860 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcc03032
]
RCA_00860 (holA)
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_00860 (holA)
Enzymes [BR:
rcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RCA_00860 (holA)
DNA replication proteins [BR:
rcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RCA_00860 (holA)
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RCA_00860 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPD_arch
SPOC_AIPP2
DUF2572
Motif
Other DBs
NCBI-ProteinID:
AFB20749
LinkDB
All DBs
Position
complement(199553..200524)
Genome browser
AA seq
323 aa
AA seq
DB search
MKFYFSQIKRLFALITAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTSIEYTELNIAS
LEILLNSPNFFGQKELIKVRSVGNSIDQNLKKILSRDYINFPVFIGEEMTSSSSFRKFFE
TEEYLAAAACYHDDEVKIERIILDQVGKTNKIISKEANAYLKAHLKGDHNLVCNEINKLI
YFVHDRKEITLNDVLEVISSKITANGSDLAIYFSKKDYSNFLQELDILKKQNINEVLMIR
ALIRHYLNLYIVLSKVKNGECLELAIKSLSPPIFYQYINDFTKIASSLSLAECLETLKLL
QQAEVEYKLNPASFDLLQKIYTR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttatttttcacaaattaagcgattatttgcactaataacagctggaaaaatt
agagctcttttactatatggtcctgataaaggttatatagaaaaaatttgtaagcactta
gtaaaaagcttaaatatgctacaaacttctatagaatatacagaacttaatattgcatct
ttagagatattgcttaattcacctaatttttttggtcaaaaagaattaattaaagttaga
tcggtcgggaattcaatcgatcagaatttaaaaaaaattctaagccgtgattatataaat
tttcctgtatttataggtgaggaaatgacttctagttcaagcttcagaaaattttttgaa
acggaagaatatttagcggcagccgcttgttatcatgatgatgaagtaaaaattgaaaga
attattttagatcaagtaggaaaaactaataaaattataagtaaagaagctaatgcttat
ttaaaagctcacctaaaaggtgatcataatctagtttgtaacgaaataaataaattgata
tattttgttcatgatcgaaaagaaattactttaaacgacgtcctagaagttataagtagc
aaaattacggcaaacggtagcgatttagcaatatatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatatattaaaaaaacaaaatatcaatgaggttttaatgatcaga
gccttaataaggcattacttaaatttatatatagtgttatcgaaagtaaaaaacggtgag
tgtttggaacttgcaataaaatcattatcaccaccaattttttatcagtatattaatgat
tttacaaaaatagcaagtagtcttagcctagctgaatgtttagagactttaaaactgctg
cagcaagcagaggtagaatataagctaaaccctgctagctttgatttactccaaaaaatt
tatactcgatga
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