Rickettsia canadensis CA410: RCA_01040
Help
Entry
RCA_01040 CDS
T01736
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rcc
Rickettsia canadensis CA410
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_01040
Enzymes [BR:
rcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCA_01040
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RCA_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFB20785
UniProt:
A0ABM5MTH9
LinkDB
All DBs
Position
complement(245590..248208)
Genome browser
AA seq
872 aa
AA seq
DB search
MSNLQQEASDPKYSVWVSASAGTGKTKVLTDRFLRLLIKGVEPANILCLTFTNAAAVEMQ
ARINSKLKYLSLCNVEKLEEELFLMLGNKPLQQELENAKTLYDKILNSNEPLNIYTIHAF
CQKILKTCPLEAGITPEFKILEETKLQDIFLNIRNEIYLSDEHNDLMKILLNRFHEITLQ
DIFSEIIEQKIKFKKLFTHKTIPGEIQNKRLALGELNNIYDNVKNLFVKYDLEIEPKDFF
FTKDGKKRKSLLSKELIRKYPKLLLELEKITSEIYHLDELRRIEELEYHTNLLTKLAYII
LKKYDSYKEENNLLDYDDLIYYTEKLLNNKATHEWLLHKLESKINHILVDEAQDTTPTQW
NIITTLITEFNAMDKPNNSIFIVGDDKQSIFSFQGADLRNFSLVNEQLKANLTKANKKFK
NITLEYSYRSCAEILQFTHYVLQNIKSDYPNLFFPDNPLISSFRTHQGTVTVWPLVTSEK
QEELFWALPEDYKNSKSAADLLIEQIVNFIKEKIESKEILPSICAMKSGYTKINLENSKE
FVSQGAECILNVQCPSHSDYKNDSANFSNSSRISEKDFMILVRKRDEFSNNLIKELSKAK
LKIEISDRINLKDHLSIMDLMSVAKFVLLPDDDLNLACLLKSPIIGINEQQLYELLINKK
DQSLWDTLSLYLDIYEKLNSFIEIYKTSTAENFFTIVVNSLNLRELLNVYNGDDSDDMIN
ELLTLSSNYANDIDNSLQGFVAWFENNNIYIKRNMEHSDKIRVMTVHGSKGLEAPIVILC
DSTSLPVSSNKFIWNDNGEMFFSANAADTPQFLQELKEAEKLKDLQEYIRLLYVAMTRAK
DHLIICGFSNKATTSENSWYKIAKQTFDKFFN
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttacaacaagaagcatctgatcccaagtattccgtttgggtatcggcatca
gcaggtactggtaaaaccaaggtcctaaccgatcggttcttacgcttattgatcaaaggc
gtagaacctgcaaatattttatgccttacttttactaatgctgctgctgtagaaatgcaa
gcaaggattaatagtaaacttaaatatctttctctttgcaatgtagaaaaactagaagaa
gaactgtttttaatgctaggcaataagccattgcaacaagaactagaaaacgcaaaaact
ttatacgataaaatactaaatagcaatgagcctttaaatatctatactatccatgctttt
tgtcaaaaaatccttaaaacttgtcctttagaagcaggtatcacaccggaatttaagatt
cttgaagaaactaaactacaagatatcttcctaaatattagaaatgaaatttacttaagc
gatgagcataatgacttaatgaaaattttacttaaccgttttcatgaaatcactctgcaa
gatatttttagtgaaatcatagagcaaaaaattaaattcaaaaagttatttactcataaa
actattccaggagaaatacaaaataaaagattagcattaggagaattaaataatatttac
gataatgtaaaaaacttatttgtaaaatatgatttggaaatagaaccaaaagattttttt
tttaccaaagacgggaaaaaacgtaaaagtcttttatcgaaagaattaataagaaaatat
cctaaattattactagagctagaaaaaattacctctgaaatttatcacttagatgagcta
cgtcgcatagaggaactagaatatcacacgaatttacttactaaacttgcttatattatt
ttaaaaaaatacgattcatataaagaagaaaataatttactcgattatgatgatttaatt
tactacaccgaaaaattactaaataataaagctacgcacgaatggttgctgcataagctg
gagagtaaaataaatcatattttggttgatgaagcacaagacacaacccccacgcagtgg
aatattattactactttaataacagaatttaatgccatggataagccaaataatagcatt
tttatagtaggcgacgataaacaatccatcttcagttttcaaggtgccgatcttcgtaat
ttcagcttagtaaatgagcaactaaaagcaaaccttacaaaggctaataagaaattcaaa
aatatcacccttgaatattcatatagatcatgtgcagagattttacaatttactcactat
gttttgcaaaatataaaatctgattaccctaatttattctttccagataatcctttaata
tcatcatttcgtacacatcaaggtacagtaacagtttggcccttagtgacaagcgaaaaa
caagaagaacttttttgggcattgcctgaagattataaaaattctaaatctgcagccgat
ttacttatagagcaaattgtaaatttcataaaagaaaaaatagaaagcaaagaaatctta
ccctctatctgtgcaatgaagagtggttatacgaagatcaacttggaaaatagcaaggag
tttgtaagccaaggagcagagtgtatactaaacgttcagtgtcctagtcatagtgattac
aaaaacgattcagccaatttttcaaattcatcgcgtatatctgaaaaagattttatgata
ctagtacgaaagcgagatgaatttagtaataatttgataaaagaacttagcaaagctaag
cttaagattgagataagtgatagaattaatcttaaagatcatttatcgataatggattta
atgtccgtggctaaatttgtgttattacctgatgatgatttaaaccttgcctgcttacta
aaatcaccgattattggaataaatgagcagcaattatatgaacttcttataaataaaaaa
gatcaaagcctgtgggatactctatcattataccttgatatatacgaaaaattaaattcc
ttcattgagatttataaaacctcaactgccgagaatttttttactatagtagttaatagt
ctaaatttgcgtgaactcttaaatgtttataacggcgatgatagtgatgacatgataaat
gagttattaacattaagtagtaattatgcgaatgatattgataattctttgcaaggattc
gtcgcttggtttgaaaataacaatatctatattaaacgtaatatggaacattcggataaa
ataagagtaatgactgtacacggctctaaggggcttgaagcccctattgttatattatgt
gattctacttctttaccggtaagcagcaataaatttatttggaatgataacggggaaatg
tttttttctgcgaatgctgctgatactccacaatttttgcaagaactaaaagaagctgaa
aaactaaaagatctacaggaatatataagactactctacgttgcaatgacgagagctaaa
gaccatctaattatatgtggctttagtaataaagctactacttctgaaaactcttggtat
aaaatcgctaaacaaacttttgataaattttttaattaa
DBGET
integrated database retrieval system
