Rickettsia canadensis CA410: RCA_02145
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Entry
RCA_02145 CDS
T01736
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RCA_02145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_02145
Enzymes [BR:
rcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCA_02145
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCA_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
nSTAND3
AAA_30
UvrD-helicase
AAA_14
PhoH
AAA_19
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AFB21002
UniProt:
A0ABM5MSC6
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All DBs
Position
498721..500667
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AA seq
648 aa
AA seq
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MQIAKILLPIAKLFPLDYLIPKDLSVNIGDLVIVSFRNKELTGIVWELVSDSEIQKLKTI
HRKVSLNLNITPEVLELIKWMSVYYMSELGSIAKLVLPIDIAAKPIKIKEQKVNNDFILP
DLSEEQKQAVTVLNESNKPVIIKGVTGSGKTEIYFHLIADYLVKGKQVLIMLPEIALSTQ
IINRFIERFGFEPIIWNSSVTKAQKQMILRGILIDKVKVVIGARSSLFLPFKNLGLIVID
EEHDESYKQDDGILYNARDTAIVRGTFDKAQIVLCSATPSIETMYNVDLGKYRLINLINR
YKNAHLPNIEVIDMTKEKLPKNCYLSKILIEAIKANLANKKQTLLFLNRRGYAPLMLCKA
CGYRLTCKYCSSWMVVHKANKKLECHHCGYQSKIFSVCPECLEDATLTICGPGIERIEEE
AKALFPERKIAVISKDHAKNTEKIAQILHQIENLEIDILIGTQMITKGYHFPNLTLVGVI
DADLGSNNADLRASERTFQLLHQVGGRAGRGDSKGLVYLQSYCPNNIIFSYVKVSYEDSF
FAHELEIRKSAYMPPFSKMASVILSGASEHKILAIAKNMVRIAPKANVKILGPASSLMSK
LAGKYRYRILIIADKKFNLQKYLKFWLSLIKIPSFCQVKIDIDPKSFY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagcaaaaatattattaccgatagcaaaattatttccgctagattatttaatt
cctaaagatttatctgtaaatataggtgatcttgtcatagtgtcttttagaaataaggaa
ttaaccggtatagtatgggagcttgtatcagattctgaaatacaaaaattaaaaactatt
cataggaaagtatcgctaaacttaaatattactccagaagttttagaattaattaaatgg
atgagtgtttactatatgtcagagcttggtagtatagccaagttagtattacctatagat
attgctgcaaaacctataaaaattaaagaacaaaaagtaaataacgattttatattacct
gatttatcagaagaacaaaaacaagcagtaacagtcttaaatgaaagtaataagccggta
attattaaaggtgttactggttctggtaaaacagaaatatattttcatttaatagcagat
tacttagtaaaaggtaaacaagtgcttattatgcttcctgaaattgcacttagtacacaa
attattaatcgttttatagagcgttttgggtttgagcctataatatggaattctagtgtt
acgaaagctcaaaagcaaatgattttaagaggcatattaattgataaagttaaagtagta
attggggctagaagtagtttatttctgccttttaaaaatttaggtctaatagtgattgat
gaagagcatgatgaatcttataaacaagatgatgggatattatataatgctagggataca
gctatcgtcagaggtacatttgataaagcacaaattgttttgtgttcggcaacaccatct
attgaaacaatgtataatgtagatttagggaaatatcgtttaattaatttaattaataga
tataaaaatgctcatttgccgaatatagaagtgatcgacatgactaaagagaagttacct
aagaattgctatttatctaagattcttatagaagctataaaagctaatttagctaataaa
aagcaaacattattatttcttaataggagaggttatgctccactaatgctctgcaaagct
tgcggttacagattgacctgcaaatattgttctagctggatggtagtacataaagcgaat
aaaaaacttgaatgtcaccattgtggttatcaaagtaaaatttttagtgtttgtcctgaa
tgtctagaagatgcaacattaactatttgcggtccaggtatagagagaatagaagaggaa
gcaaaagcgctctttcctgagaggaaaattgcagttataagcaaagatcatgctaaaaat
actgaaaaaatagcacagattttgcatcaaatagaaaatttagaaattgatatattaata
gggacacaaatgattactaaaggttatcactttccaaatcttactttagtgggagtaata
gatgccgaccttggaagtaataatgccgatcttagagcatctgagcgaactttccagcta
ctacatcaagtaggtggtagagcagggaggggtgatagtaaaggtttggtatatttacaa
agctattgtcctaataatataatttttagttatgttaaagtcagttatgaagatagtttt
tttgcacatgaacttgaaataagaaagtcagcatatatgccaccgttttccaaaatggca
tcggtaattttatcaggtgctagtgaacataaaattctagcaattgctaagaatatggtc
agaattgcaccaaaagcaaacgtgaaaattttaggaccggcaagctcattaatgtcaaag
cttgccggtaaatatcgctaccgaatacttattatagccgataagaaatttaatttacag
aaatatttaaaattttggctcagccttataaaaattccctctttttgtcaggtaaaaata
gatattgatcctaagagtttttattaa
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