Rickettsia canadensis CA410: RCA_02770
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Entry
RCA_02770 CDS
T01736
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc03420
Nucleotide excision repair
rcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCA_02770
03430 Mismatch repair
RCA_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_02770
Enzymes [BR:
rcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCA_02770
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCA_02770
MMR (mismatch excision repair)
Other MMR factors
RCA_02770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFB21121
UniProt:
A0ABN4A8Y8
LinkDB
All DBs
Position
complement(630853..632808)
Genome browser
AA seq
651 aa
AA seq
DB search
MQKQDFLNTLNPQQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIYQNLASPHNILAV
TFTNKAAKEMVERVHSLINCDGLNIGTFHSMAARILREHIEHLNLGLNNRFTIISQDEQL
KLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPSKLSVSDTNLPVQRVAKLVYQEYQ
QNLLISNALDFGDFLLYNNELFIKNPDILKYYQDKYRYILIDEYQDTNIVQYLWARMLAS
LYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFLGATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDRENGEKIKIVSCWSDKEEARYIAGEIERLVREDRYNAGNIAILVRAG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVIAYIRISLNQNDNLALERIVNVPKRA
IGAATLSKIKAYAIEQNISHFAAIKKMLEKGKAKSYETLKDFVTKIDNWHERFNTDAPIN
VVKVILHDSGYLEMLKEEQTEEAFGRIENINEMLRAIAEFNDIHDFIEHSSLVMENESLE
TNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQKSLDEDGEKGLEEERRIAYVGITR
AKKDLYITYAESRKIFYEIVRSYPSRFITEIPDEITIRTSSVKKYNAFYKF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaaacaagattttctaaatacattaaatccgcaacagcaaaaagcagttcttcac
actgagggaccgcttttattgcttgcaggtgcagggactggtaaaacaaaggtactgacc
tcaaggatagctaatattatttatcaaaatttagcatcgcctcacaatattctagctgtt
acttttactaataaagcagctaaagagatggtggaaagggttcatagtttaattaattgc
gatggtctgaatatcggtactttccactcaatggcagctaggatattgcgggaacatata
gagcatttaaatcttgggttaaataacagatttactattattagtcaagatgaacaatta
aaattagttaaagatatagtcaagctaaaagatattgatactaaaaaatatgctcctaaa
ttaatacatatcataatttctagatggaaagatcaaggattactaccaagtaaattatca
gtctcagatactaatctaccagtgcaacgagtagcaaaacttgtttatcaagaatatcaa
cagaatcttcttatctctaatgcattggattttggcgattttctactttataataatgag
ctgtttattaaaaatcctgatatattaaaatattatcaagataaatatcggtatattttg
atagatgagtatcaagatacaaatattgtgcagtatttatgggcaagaatgctcgcaagt
ttatataaaaatatctgttgtgtaggggatgatgatcagtctatttacggctggcgtgga
gcagaagttggtaatatattgcgttttgaaaaagattttttaggtgcaacaattattaaa
ttagagcaaaattatagatcaactctaccaatacttgctgccgcttccaatgttattaat
aataataaaaaccgtcacggtaaaacattatggacagatagggaaaatggtgaaaagata
aaaatagtctcttgttggagtgataaagaagaggcaagatatatagccggcgaaatagaa
agattagtaagagaagaccgatataatgcaggtaatatcgctatattagtacgggcaggt
ttccaaactagaagttttgaggaagcttttataaatagtgctatgccttataaaattata
gggggtttaagattctatgaacgaatggaaattagagatgtcattgcttatatccgtata
tctttgaatcaaaatgataatttagcacttgaacgtattgtaaatgtaccaaaaagggca
ataggtgcagctactttaagtaaaattaaggcctatgctattgagcaaaatatttctcat
tttgcagctattaagaaaatgttagaaaaaggtaaagcaaaatcatatgaaactctaaaa
gattttgttactaaaatcgataattggcatgaaagatttaacaccgatgccccgataaat
gttgttaaagtaatacttcatgattccggttaccttgaaatgcttaaggaggagcaaact
gaagaggcattcggtagaatcgagaatattaatgaaatgcttagagctattgccgagttt
aatgatattcatgattttatcgaacattcaagcttagttatggaaaatgagagcttagaa
actaattacggcggttccgtaactatcatgaccctgcacgctgctaaagggcttgagttt
gatgtagtgtttttacctggttgggaagagggggtatttccatctcaaaaatctctagac
gaagatggcgaaaaaggcttagaagaagaacgccgtattgcttatgtcggcattactaga
gctaaaaaagacctctatattacctatgcggaaagccgcaaaatattttatgaaatagta
cgctcttacccttcaagattcataaccgaaattcctgacgaaattacaatcaggacctct
tctgtgaaaaaatacaatgctttttacaagttttaa
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