Rickettsia canadensis CA410: RCA_02975
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Entry
RCA_02975 CDS
T01736
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc00300
Lysine biosynthesis
rcc00470
D-Amino acid metabolism
rcc01100
Metabolic pathways
rcc01110
Biosynthesis of secondary metabolites
rcc01120
Microbial metabolism in diverse environments
rcc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCA_02975 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCA_02975 (dapF)
Enzymes [BR:
rcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RCA_02975 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
CntK_N
Arf
Motif
Other DBs
NCBI-ProteinID:
AFB21162
UniProt:
A0ABM5MRN9
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All DBs
Position
complement(672055..672864)
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AA seq
269 aa
AA seq
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MISKINFVKMHGLGNDCVIVNKQDLLNSHNLSQLAKNIADRHTGIGCDQFIIYENHNNFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKKDITIVVGNKELLCRIEDENKISVNVGA
VSFNETWMPSRDKIWAFAARYMIDLKETICVDVGNPHLVIFSKLESQDQKIVGETLQAKE
LFANGVNVNFAEIKDNKINLSVWERGVGLTGACGSGACGSFAAGLKRGFIHSPSTVVFKH
GSLNMKEENGNIIMQGSATLIAEGVYCCE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattgtgttattgtt
aataaacaagatttattaaattcacataatttatcgcaactagcaaaaaatatagcggat
cgtcacactggtattggttgcgatcagtttattatttatgaaaatcataataatttttat
gaaatgattatatataatatagatggctctagtgctaaattatgtggtaatgctacaaga
tgtttagccaagttaatttatctcgatacgggaaagaaagatattaccatagtagtaggt
aataaagaattactatgccgtattgaagatgaaaataagattagcgttaatgtaggagct
gttagttttaatgaaacttggatgccgagtcgtgataaaatttgggcattcgcagcgcgt
tatatgattgatttaaaggaaactatttgcgttgatgtcggtaacccgcatttggttatt
tttagtaagctagagtctcaagatcaaaaaattgtcggtgaaacattgcaggctaaagaa
ttatttgctaatggggtaaacgttaattttgccgagattaaagataataagattaattta
tctgtttgggagcgaggagtagggttaactggtgcttgtggaagcggagcttgtggtagt
tttgctgccggtttaaaacgtggttttatccattcaccaagcactgtagtatttaagcac
ggtagccttaatatgaaggaagaaaatggtaatataataatgcaaggatctgctacactg
atagctgaaggagtatattgttgtgaataa
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