Rickettsia canadensis CA410: RCA_03520
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Entry
RCA_03520 CDS
T01736
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcc
Rickettsia canadensis CA410
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcc03032
]
RCA_03520
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_03520
Enzymes [BR:
rcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RCA_03520
DNA replication proteins [BR:
rcc03032
]
Prokaryotic type
DNA Topoisomerases
RCA_03520
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RCA_03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
WHD_POLR3C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFB21263
UniProt:
A0ABN4A9Y1
LinkDB
All DBs
Position
781232..783565
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AA seq
777 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAIKYDISDKASK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNKVKAADFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKAEEYWDISLKMQNSNNELFTAKLTHINNQKLERFSITNKKDAKDLTKKLKS
QNFHIDQIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAVADIRKLIDKNYGDKYLPSSPRIYKSTVKNAQEAHEAIRPTNIT
YTPDSLKEKLAKDYYRLYELIWKRTIACQMENVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPLLKENEQLNTKEIIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYATILSVLQDRKYVSLKKKRFMPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKSALSNFWSGFNHNIKSVNEQKITEIISYVQKALDYHLFGENQESKAC
PSCKTGELSLKLGKFGAFLACNNYPKCTFRKSIVSGNNNNENEDKLSNTPNDENKVLGTD
KDGIEIYLKKGPYGPYIQRGEHEDKVKLKRSPVPASLNQSDITLDIALKLLSLPLKIGTH
KDTHKEIMIGYGKFGPYIKYIGKFISIPKKYDFLNLSLDEAIQLIEDNKTKLEKKQA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacaataaataaatatttaggt
gacgagtttaaggttattgcatcattcggtcatataagagatttaccttctaagaaagga
tcagtattacctgatgaaaattttgcaataaaatatgacatttcagacaaagccagtaaa
tatgtagacgcaatagttaaagatgcgaaaaaagccgatgcggtatatcttgcaaccgat
ccggatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
aaggttaaagccgctgattttttcaaaagagtagcctttaatgaaatcactaaaaaagca
attattcatgccgttgagaaccctagaaaacttgacactaatttagtaaatgctcaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttacccggatgtaaatcagcaggacgtgtacaatctgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaaggctgaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcatataaacaatcaaaaacta
gaaagattctcaattactaataaaaaagatgcaaaagatttaaccaaaaaattaaagtct
caaaattttcatatcgatcagatagaaaagaaacaacagaaacgtcaaccgcaacctcct
tttattacttcatcgctacaacaagaagcagcacggaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggggttgacataggtaaagaaactataggg
cttattacctatatgagaaccgacggtgttacattatcaaatgatgcagtagcagatata
cgtaagttaatcgataaaaattatggtgataaatatttaccgagtagccctagaatttat
aagtctacagtaaaaaatgctcaagaagctcatgaagcgataagaccgacaaatataacg
tatactcctgatagcttaaaagaaaaattagcaaaagactattatagactctatgaacta
atttggaaaagaactatagcctgccaaatggaaaatgttataatggatttggtagttgca
aatttagcttcagaaaataaagaatatttggcaaaagcaaatggatcaactatagccttt
gatggattttataaggtttatcgtgaaagtgtagacgatgaagcagaggaagaaaataag
atgctgccgcttttaaaagaaaatgagcaactaaacactaaagaaattattccaaatcag
cattttacagaaccgcctccaagatattcggaagcaagcttagtgaaaaaacttgaagag
cttgggatcggtcgcccatccacctatgctactattttatcagttttacaagatcgaaaa
tacgtttctcttaagaaaaaacgttttatgcctgaagagctgggacgtttggtaacagta
tttttagttggttttttcaaaaaatatgtagaatatgactttaccgcaggtcttgaaaat
gaattagatgaaatagcagccggcaagcttgaatggaaatctgccttaagtaatttttgg
agtggttttaaccataatattaaatcggtaaacgaacaaaaaataactgagattattagc
tatgtacagaaagcccttgattatcacttgtttggtgagaatcaagaatccaaagcttgt
ccttcatgtaaaacaggtgaacttagtttaaagcttggtaaatttggagcgtttttagca
tgtaacaattaccctaaatgtacttttagaaaatctattgttagcggtaacaataataac
gagaatgaggataagctttctaatactcctaatgatgagaataaagttttaggcaccgat
aaagatggaatagaaatatatctgaaaaaaggaccttacggaccttatattcaacgcgga
gaacatgaagataaagtaaaactgaaacgtagccccgtacctgctagcttgaaccaaagc
gatatcacacttgatatagcattaaagcttctaagcttaccgcttaaaattggtactcat
aaggatactcacaaggaaattatgataggatacggtaaatttggtccttatataaaatat
attggtaagtttatttcaatcccaaagaaatatgattttctaaatttaagcttagatgag
gcaatacagctaatcgaagacaataagacaaaattagaaaagaaacaagcgtga
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