Rickettsia canadensis CA410: RCA_04500
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Entry
RCA_04500 CDS
T01736
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rcc
Rickettsia canadensis CA410
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcc03016
]
RCA_04500 (trmE)
Transfer RNA biogenesis [BR:
rcc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RCA_04500 (trmE)
Prokaryotic type
Methyltransferases
RCA_04500 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
cobW
GCV_T
MMR_HSR1_Xtn
ABC_tran
DUF5700
PduV-EutP
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AFB21452
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All DBs
Position
976264..977601
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AA seq
445 aa
AA seq
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METIFAQSSAFGKAGVAVFRISGPKSLEVLQLLTGRKDFKSRLMYYQQITFPESGELIDN
AMVVYFKSPGSFTGEDVAEIYTHGSKAISIMLINALLNIPNIRLAEAGEFTKRAFLNNKF
DLTAAEGIADLINAETIMQHRQAIRQAGGALEELYNNWREQLLQIISLLEAYIDFPDEDI
PDSILNKVNNTHTNLINEISNYLNDNRRGELLNSGLKLAIIGPPNAGKSSLLNFLMQRDI
AIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIREESSDIIEQEGIKRAINSAKTADIKI
IMFDAEKLDSSINEGIIDLIDENTIIIINKIDLIEPSKIFLIEDKYKCLRVSIKNNIALN
DILKNIENIAENMAGFTETPYITNQRHRHYLKQALTYLKNFTLDNDLVLATEDIRMTVRC
IGTITGVINVDEILGEIFKNFCIGK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacaatatttgcacaaagctctgcatttggtaaagcaggcgtagcggtttttagg
atttccggtcctaaaagcttagaagtgttgcagctacttaccgggagaaaggactttaaa
tcgagattaatgtattatcaacaaattactttccctgagagcggcgaactaattgataat
gctatggtagtttattttaagtcaccaggtagctttacaggtgaagacgtagcagaaatt
tatacgcatggtagtaaagctatttctataatgcttattaatgcattgttaaatataccg
aatattcgtttagcagaagctggagaatttaccaaaagagcttttttaaataataagttt
gatttaacggctgctgaaggaatagccgatttaattaatgctgaaactattatgcagcat
aggcaagcaattagacaagcaggtggggctcttgaagaattatataataattggcgagaa
cagttacttcaaattatctctttacttgaggcttatatagattttcctgatgaagatata
ccggatagcatccttaacaaggttaataacactcatacaaaccttataaatgaaatatct
aattatcttaacgacaatagacgaggagaactactaaatagtggtcttaagcttgcaatt
atcggaccgccgaatgcaggtaagtctagcctactaaacttcttaatgcaaagagatata
gcaattgtctcaaatatcgcaggtactactagagatataattgagggccatttagacatt
ggcggctatcctattattttgcaagatacagcaggtataagagaagaaagtagcgacatt
atagagcaagaaggtataaaaagagctataaattcagctaaaacagcagatattaaaatt
attatgtttgatgctgagaaattagattcatctataaatgaaggtattatagatttaatt
gatgaaaatactatcattataatcaataaaatcgatttaattgaaccgagcaaaatattt
ttaattgaagataaatataaatgcttaagagtttcaattaagaataatatagccttaaac
gatatattgaaaaatattgaaaatattgccgaaaatatggcaggatttactgaaacacct
tacataacaaatcaacgtcatcgtcattatttaaaacaagctcttacctatttaaaaaat
ttcactctagataatgatttagtcctagcaactgaagatattagaatgacagtacgctgc
atcggtactattacaggcgttattaatgtggacgaaatactaggcgagatctttaaaaat
ttctgcatagggaaatga
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