KEGG   Rickettsia canadensis CA410: RCA_04975
Entry
RCA_04975         CDS       T01736                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
rcc  Rickettsia canadensis CA410
Pathway
rcc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RCA_04975 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcc03400]
    RCA_04975 (uvrA)
DNA repair and recombination proteins [BR:rcc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RCA_04975 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RCA_04975 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 AAA_16 AAA_25 nSTAND3 RsgA_GTPase ATPase DnaJ_CXXCXGXG CA109-like
Other DBs
NCBI-ProteinID: AFB21544
LinkDB
Position
complement(1088913..1091774)
AA seq 953 aa
MNQEYIKVRGAKEHNLKNINVDIPRNKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIP
YSPATGLPIHSQTVSEMVDIINELPKGTKIYLLAPIVRGYKGEFKREIMNLKKQGFQKLI
VNEEVCEIDDLPKLDKNKKHNIEVIVDRIVLDENLGNRLADSLESSLKLADGITYLEIVE
LPPAVKTEFEKNQRITFSEKYSCPVSGFQLTEIEPRIFSFNSPFGACPKCEGIGKEFFFD
RDLIVPDHRISIKDGAIVPWGSTSSKFILETLKALANHYKFSIEVPFVSLSQNVKDILFE
GSGEETIKFEFHDGSKTQIIKQPFAGIIPSLQEKDRTIESVLIKEELAKFKSEHKCTACN
GYRLKDEALCVKIANLHIGEVAGMSIAALQKWFSNLEEKLNKKQLFIAERILKEITERLK
FLMNVGLDYLTLSREAGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNTRLI
ETLKRLRDIGNTVLVVEHDEETMYEADHIIDIGPGAGIHGGRVIAEGNAEEIKNFEESIT
GRYLSGRQTIKVPSETRLGHDNRAIELLGAVSNNLDNVDIKIPLGTFTAITGVSGSGKSS
LMIHTLYKAALKHLEPTSKVLPGKYRELKGLEYIDKIIDINQSPIGRTPRSNPATYTGAF
THIRDWFVELPESKARGYKVGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDICNG
HRYNRETLEIRYKGKSIADILMMTVEDAMQFFAKIPLIYEKLITLNEVGLGYIKIGQSAT
TLSGGEAQRVKLAKELSRRSTGKTLYILDEPTTGLHIDDINKLLKVLHKLVDMGNTVLVI
EHNLDVIKTADYIIDVGPEGGDKGGKIVVCGTPADIATCIDSHTGRYLKQYLK
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgaaccaagaatatattaaggtacgcggtgctaaagagcataatctaaaaaatataaat
gttgatattccaaggaataaatttgttgttatcaccggccttagcggttcaggcaagtct
tctttagcgtttgatactatttatgcagaaggacaaaggcgatatgttgaaagtttatct
tcatatgcaaggcaattcttacatttacaaaataaaccgaatgtggaatctatttccgga
ttatcacctgctattgcaattgaccaaaaaactacttccaaaaatccacgttctacggtc
ggaactataacggaaatttacgattatcttaggttattatatgcaagggtgggtattcct
tactctccagcaacgggtcttcctatacatagccaaacagtttcagagatggtagatata
attaatgaattacctaaaggtacgaaaatatatttgctcgctcctattgttagaggatat
aagggtgagttcaagcgtgaaattatgaatctgaaaaagcaaggttttcagaaattaata
gttaacgaggaagtttgtgaaattgatgatttaccgaaacttgataaaaataagaaacat
aatatagaagtaatcgttgatagaatagttctagacgaaaatttaggtaataggcttgca
gatagcttagagagttccttaaaacttgccgatggtattacttatttagaaattgtagaa
ttgccgccagcagttaagaccgagtttgaaaaaaatcagcgtattactttttccgagaaa
tattcttgtccagtatctggttttcagcttactgaaatagaacctcgaatcttttctttt
aatagcccttttggagcatgccctaaatgtgaaggaataggtaaggaatttttttttgat
agagacttgattgttccagatcacagaatatctattaaagacggtgcaatagtaccttgg
ggtagtacatcatctaaatttatcctagagacattaaaagctcttgccaatcattataaa
ttttctattgaagtaccttttgtcagtttatcacaaaatgttaaggacattttatttgaa
ggttcgggagaagaaacaataaaatttgagtttcacgatggttctaaaacacaaataata
aaacaaccttttgctggtataataccaagtttacaagaaaaggatcgtactatagaatca
gttctaattaaagaagaacttgctaagtttaagtcagaacataaatgtactgcttgtaac
ggatatagattaaaagacgaagcattatgcgttaaaatagcaaatcttcatataggcgaa
gtagcaggtatgagtattgcagccttgcaaaaatggtttagtaacttagaagaaaaatta
aataaaaagcaattatttattgccgagcgtatacttaaagaaattaccgagagattaaaa
tttcttatgaatgtcgggcttgattatctaacgttatcacgagaagcaggtactttatca
ggaggggaaagtcaacgtattcgtcttgcatctcaaataggttcaggacttagcggtgtt
ttatatgtacttgatgagccgtctatcggtcttcatcaacgagataatacaagattaatt
gagacactaaaaaggcttagagatataggtaataccgttttggtagttgagcatgatgaa
gaaacaatgtatgaagcagatcatattattgatataggaccaggagccggtattcacggt
ggacgtgttattgcggaagggaatgctgaagaaataaagaattttgaagaaagtattaca
ggtaggtatctaagcggtcgtcaaacaattaaagtaccttctgaaacacgattagggcat
gataatagggccatcgaactacttggagcggtttctaataatttagataatgttgatatc
aaaattccacttggtacgtttactgctataacaggagtatcgggaagcggtaaatcaagc
ttgatgattcatactctatataaagcagctttaaagcatttagaaccaactagtaaagta
ttgcccggaaaatatagagagttgaaagggcttgaatatattgataaaattatcgatatt
aatcaatctccaataggtagaactcctcgttcaaatcctgcgacttatacaggtgcattt
actcatattagagattggtttgtagaattacctgaatcaaaagcgagaggatataaagta
ggtagattctcgtttaacgttaaaggtggtagatgcgaagcatgtcaaggtgacgggcta
attaaaatagagatgcattttttacctgacgtatatgtaaaatgtgatatttgtaatggt
cacagatataatagagaaacgcttgaaataagatataaaggtaaatcaattgccgatata
ttaatgatgacggtagaagatgcgatgcaattttttgcaaaaatcccgttaatctacgaa
aaactaattaccttaaatgaggtcggacttggctatattaaaatcggtcaatctgctact
actctgtcaggcggtgaggcacagcgtgttaagcttgctaaagaattatcaagacgttca
accggtaaaacgctttatatacttgatgaaccgactacaggattgcatatcgacgatatt
aataaattattgaaagtgttacataaacttgttgatatgggcaataccgttttagttatc
gagcataatctagatgttataaaaacagcagattatattattgatgtcggtcctgaaggt
ggtgacaaaggcggtaagatagttgtatgcggtactcctgcggacattgctacatgcatc
gatagtcataccggtagatatttaaagcaatatttgaaataa

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