Rickettsia canadensis CA410: RCA_05160
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Entry
RCA_05160 CDS
T01736
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc03030
DNA replication
rcc03430
Mismatch repair
rcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCA_05160
03430 Mismatch repair
RCA_05160
03440 Homologous recombination
RCA_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcc03032
]
RCA_05160
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_05160
Enzymes [BR:
rcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RCA_05160
DNA replication proteins [BR:
rcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RCA_05160
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RCA_05160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
RuvB_N
AAA_19
AAA_5
AAA_30
AAA_18
TIP49
ResIII
AAA_assoc_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFB21575
LinkDB
All DBs
Position
1128959..1130593
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AA seq
544 aa
AA seq
DB search
MTDINSSNKYIPFARKYRPGNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTT
SARIIAKTVNCSALITEDTVVNSVKLKYNEQGAKPIGNRRVTSNNVGKFKSIDYTIRTCE
ECTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKG
AFNALLKTLEEPPPHIIFIFATTEVQKIPATIISRCQRYDLRRLSFEEIFKLLEYITKQE
NLKADIEALRIISFKSEGSARDAVSILDQAASMSAKSDNIISSQVINQMLGLVDTSVIIE
FFEYIIRRETEKAINLINKLYSFSVNLEIFIESVADFIAYLNKVKMLPNYRLPIYESFND
RIKNILSEISLPYLSILWQIYNKGVVEIKISYNQLTETEMLVIKSIYSRSLPLLTDFDVN
NQNLNQSINPEIKKKFEIVDFLEYLYKNNEIDIYYFLLNHTELKNFGYNRLEFFSLEITS
KIKKQIEDLLVTFSKEKFEVIIIKEQNKQTLKNQLIGKIEASNDFALIKKYFPNAMISDI
LLKN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatataaattcatctaataagtatattccttttgcaaggaaatatcgtcctggt
aactttgccgagcttcaggggcaagaggtactagtcaaagttttaagctatactatttta
aatgataggcttgctggaggttatcttttaacaggtattagaggggtcggtaaaactacc
tcggcccgcattattgctaaaaccgtaaactgttctgctttaattactgaagacactgta
gtcaattcagttaagcttaaatacaatgagcaaggagcaaagcctataggtaataggaga
gtgacaagcaacaatgtaggtaagtttaaatcaattgactacactattagaacatgtgaa
gaatgtacgaactgcattagttttaacaatcataatcatcctgatataattgaaattgat
gcagcaagtaaaactagcgtagatgatatacgtagaattatagaatcagctgagtataaa
cctctacaaggtaaacataaaatcttcattattgatgaggtacatatgctttctaaagga
gcttttaatgcacttcttaagactttggaagaaccaccacctcatataatatttattttt
gcaacgacggaagtacaaaaaatacctgcaactattatttcaagatgtcaacgttatgat
ttaaggcgtctgagttttgaagagatttttaaattacttgaatatataactaagcaagaa
aatttaaaagccgatatagaagcactaagaattatatcttttaaatcagaaggttcagca
cgtgatgcagtatctattttagatcaagcagctagtatgtcggcaaaatccgataatata
attagctctcaagtaattaatcaaatgcttggactcgttgatacttcagttataatagaa
tttttcgaatatattatccgtagagaaacggaaaaagctataaacttaataaataagctt
tatagtttttcagttaatcttgagatttttatagaatcggtagcagattttattgcttat
cttaataaagtaaaaatgttacctaattataggttgcctatatatgaatcctttaatgat
agaattaaaaatattttgagtgaaattagtttgccctatctgtcaatcttatggcaaata
tataataaaggagtcgtagaaataaaaatttcctataatcaactgacagaaacagaaatg
ttagttataaaatctatatattcgaggtcgctaccattgcttacagattttgacgttaat
aatcaaaatttaaatcaatcaattaatccagaaataaaaaaaaaatttgaaattgtagat
tttcttgaatatctatataaaaataatgaaatagatatatattacttcctactcaatcat
acggaacttaaaaattttggttataataggttagagttcttcagtcttgaaattacaagc
aagataaaaaaacaaatagaagatttactggttacttttagcaaggaaaaatttgaggtt
ataataataaaagagcagaataaacaaaccttaaagaatcagctcatagggaagattgaa
gcaagtaacgattttgctttaatcaaaaaatattttccaaatgcaatgatttcagatatt
ttacttaaaaattaa
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