Roseomonas cutis: LPC08_19440
Help
Entry
LPC08_19440 CDS
T11744
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rcd Roseomonas cutis
Pathway
rcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPC08_19440 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcd03021
]
LPC08_19440 (rho)
03019 Messenger RNA biogenesis [BR:
rcd03019
]
LPC08_19440 (rho)
Transcription machinery [BR:
rcd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LPC08_19440 (rho)
Messenger RNA biogenesis [BR:
rcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPC08_19440 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
NACHT
Spore_III_AA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
UFN48168
LinkDB
All DBs
Position
4275568..4276851
Genome browser
AA seq
427 aa
AA seq
DB search
MHLSELKAKSPGDLVAFAESLQIENASSLRKQDIMYSILKTLAENDQAIHGDGTLEILPD
GFGFLRSPQANFLPGPDDIYVSPTQVRRFGLRTGDTVEGQIRAPKDGERYFALLKVEAIN
FEPPEALKHRINFDNLTPLYPTRRLRMENPELEAAPASSKGPTKDNTHRVIDLVAPIGMG
QRALIVAPPRTGKTVMLQNIAKSISANHPDVFLMVLLIDERPEEVTDMARTVRGEVVAST
FDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLGRAYNSVVPSSGKVLTGGVDA
NALQRPKRFFGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVLDRKLSD
KRTFPAIDITKSGTRKEELLVDRATLTKMWVLRRILNPMGTQDAMEFLLDKLKYSKTNND
FFDAMNT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgaactcaaggccaagagccccggcgacctggttgccttcgccgagtcc
cttcagatcgagaacgcctcctccctgcgcaagcaggacatcatgtactccatcctcaag
acgctggccgagaacgaccaggcgatccacggggatggaaccctggagatccttcccgac
ggcttcggcttcctgcgcagcccgcaggccaacttcctccccggccccgacgacatctac
gtctcccccacccaggtccgacgcttcggcctgcgcaccggcgacacggtggaggggcag
atccgggcgcccaaggacggcgagcgctacttcgccctgctgaaggtcgaggcgatcaac
ttcgagccgcccgaggcgctgaagcaccgcatcaacttcgacaacctcacgcccctctac
cccacccgccggctgcggatggagaacccggagctagaggcggcacccgccagcagcaag
ggcccgaccaaggacaacacccaccgggtcatcgacctggtcgcccccatcggcatgggg
cagcgcgccctgatcgtggcgccgccgcgcaccggcaagacggtgatgctgcagaacatc
gccaagtcgatttccgccaaccaccccgacgtcttcctgatggtcctgctcatcgacgag
cggccggaggaggtcaccgacatggcccgcaccgtgcgcggcgaggtggtcgcctccacc
ttcgacgagccggccacccgccacgtgcaggtgacggagatggtgctggagaaggccaag
cgcctggtcgagcacaagcgggacgtggtgatcctgctcgattccatcacccgcctcggc
cgcgcctacaactccgtcgtgccctcctcgggcaaggtgctgacgggcggcgtggacgcg
aacgcgctgcagcggcccaagcgcttcttcggcgccgcccgcaacgtggaggagggcggc
agcctcaccatcatcgccaccgcgctgatcgacacgggcagccgcatggacgaggtgatc
ttcgaggagttcaagggcaccggcaattccgagctggtcctggaccgcaagctctcggac
aagcgcaccttccccgcgatcgacatcaccaagtccggcacccgcaaggaggagctgctg
gtcgaccgcgcgaccctgaccaagatgtgggtcctgcgccgcatcctgaacccgatgggc
acccaggacgcgatggagttcctgctggacaagctgaagtacagcaagaccaacaacgac
ttcttcgacgcgatgaacacctga
DBGET
integrated database retrieval system
