KEGG   Rhodospirillum centenum: RC1_0122
Entry
RC1_0122          CDS       T00785                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rce  Rhodospirillum centenum
Pathway
rce00010  Glycolysis / Gluconeogenesis
rce00020  Citrate cycle (TCA cycle)
rce00260  Glycine, serine and threonine metabolism
rce00280  Valine, leucine and isoleucine degradation
rce00310  Lysine degradation
rce00380  Tryptophan metabolism
rce00620  Pyruvate metabolism
rce00630  Glyoxylate and dicarboxylate metabolism
rce00640  Propanoate metabolism
rce00670  One carbon pool by folate
rce00785  Lipoic acid metabolism
rce01100  Metabolic pathways
rce01110  Biosynthesis of secondary metabolites
rce01120  Microbial metabolism in diverse environments
rce01200  Carbon metabolism
rce01210  2-Oxocarboxylic acid metabolism
rce01240  Biosynthesis of cofactors
Module
rce_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rce_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rce_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rce_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rce00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RC1_0122 (pdhD)
   00020 Citrate cycle (TCA cycle)
    RC1_0122 (pdhD)
   00620 Pyruvate metabolism
    RC1_0122 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    RC1_0122 (pdhD)
   00640 Propanoate metabolism
    RC1_0122 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RC1_0122 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    RC1_0122 (pdhD)
   00310 Lysine degradation
    RC1_0122 (pdhD)
   00380 Tryptophan metabolism
    RC1_0122 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RC1_0122 (pdhD)
   00670 One carbon pool by folate
    RC1_0122 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rce04147]
    RC1_0122 (pdhD)
Enzymes [BR:rce01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RC1_0122 (pdhD)
Exosome [BR:rce04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RC1_0122 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA NAD_binding_8 FAD_oxidored FAD_binding_2 DAO HI0933_like FAD_binding_3 Lys_Orn_oxgnase 2-Hacid_dh_C 3HCDH_N Thi4 AlaDh_PNT_C Amino_oxidase
Other DBs
NCBI-ProteinID: ACI97571
UniProt: B6IQ35
LinkDB
Position
109239..110645
AA seq 468 aa
MADTQFDLIVLGAGPGGYVAAIRAAQLGMKTAVVEREHLGGICLNWGCIPTKALLRTAEV
AHLIQHAKDYGITVEGPVRFDLAPIIKRSRQVAAQLSAGVKGLLKKNKVTVIDGSGRLLG
KGRLAVEKDGKPAGEYAAKHIIIATGARARVLPGLEPDGRLVWTYKEAMVPERMPKSILV
VGSGAIGVEFACFYRQMGVEVTLVEVLDRILPVEDEEISAIAAKQFTKQGIRIHTGTKVT
KLEKAADSVTATLDLGGGRTETVTVDRVIAAVGIVGNVEDIGLEATRVKVERNHIVTDAW
MRTDEPGVYAIGDVCGAPWLAHKASHEGVLCVEKIAGVQGVHPMDVRNIPGCTYSLPQVA
SVGLTERKAREAGHEVRVGRFPFIGNGKAIALGEPEGLVKTVFDARTGELLGAHMVGTEV
TELIQGYTIAKTMETTEAELMHTIFPHPTLSEMMHESVLAAYGRAIHY
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggccgacacgcagttcgatctgatcgtcctcggcgccggtcccggcggctatgtggcg
gcgatccgcgcggcccagctcggcatgaagacggccgtggtggagcgcgagcatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgcacggccgaggtg
gcgcacctgatccagcacgccaaggactacggcatcaccgtcgagggtccggtccgtttc
gatctcgcgcccatcatcaagcgctcccgccaggtggcggcgcagctctcggccggcgtg
aagggcctgctgaagaagaacaaggtcaccgtcatcgacggcagcggccggctgctgggc
aagggccgcctcgccgtcgagaaggacggcaagccggccggcgaatacgcggcgaagcac
atcatcatcgccaccggcgcccgcgcccgcgtcctgccgggcctggaaccggacggcagg
ctggtctggacctacaaggaggcgatggtccccgagcgcatgccgaagagcatcctggtc
gtcggttccggcgccatcggggtggagttcgcctgcttctaccgacagatgggcgtcgag
gtgacgctggtggaggtgctggaccgcatcctgccggtcgaggatgaggagatcagcgcc
atcgccgcgaagcagttcacgaagcagggcatccgcatccacaccgggaccaaggtcact
aagctggagaaggcggcggacagcgtgaccgccacgctggacctcggcggcggccggacc
gagacggtgaccgtggaccgcgtgatcgccgccgtcggcatcgtcggcaatgtcgaggac
atcgggctggaggcgaccagggtgaaggtggagcgcaaccacatcgtcacggacgcgtgg
atgcgcaccgacgagcccggagtctacgccatcggcgatgtctgcggcgcgccctggctg
gcgcacaaggccagccacgagggcgtgctctgcgtcgagaagatcgccggcgtgcagggc
gtgcatcccatggacgtgcgcaacatcccgggctgcacctactcgctgccgcaggtggcg
tcggtcgggctgacggagcgcaaggcgcgggaggccggccatgaggtccgtgtcggccgc
ttccccttcatcggcaacggcaaggccatcgccctgggcgagccggaggggctggtcaag
accgtcttcgacgccaggacgggcgagctgctgggcgcccacatggtcggcaccgaagtg
acggaactgatccagggctacaccattgccaagaccatggagacgacggaggcggagctg
atgcacaccatcttcccgcaccccacgctctccgaaatgatgcatgagagcgtgctggca
gcctacgggcgcgccatccactactga

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