Rhodospirillum centenum: RC1_0122
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Entry
RC1_0122 CDS
T00785
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rce
Rhodospirillum centenum
Pathway
rce00010
Glycolysis / Gluconeogenesis
rce00020
Citrate cycle (TCA cycle)
rce00260
Glycine, serine and threonine metabolism
rce00280
Valine, leucine and isoleucine degradation
rce00310
Lysine degradation
rce00380
Tryptophan metabolism
rce00620
Pyruvate metabolism
rce00630
Glyoxylate and dicarboxylate metabolism
rce00640
Propanoate metabolism
rce00670
One carbon pool by folate
rce00785
Lipoic acid metabolism
rce01100
Metabolic pathways
rce01110
Biosynthesis of secondary metabolites
rce01120
Microbial metabolism in diverse environments
rce01200
Carbon metabolism
rce01210
2-Oxocarboxylic acid metabolism
rce01240
Biosynthesis of cofactors
Module
rce_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rce_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rce_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rce_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RC1_0122 (pdhD)
00020 Citrate cycle (TCA cycle)
RC1_0122 (pdhD)
00620 Pyruvate metabolism
RC1_0122 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
RC1_0122 (pdhD)
00640 Propanoate metabolism
RC1_0122 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RC1_0122 (pdhD)
00280 Valine, leucine and isoleucine degradation
RC1_0122 (pdhD)
00310 Lysine degradation
RC1_0122 (pdhD)
00380 Tryptophan metabolism
RC1_0122 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RC1_0122 (pdhD)
00670 One carbon pool by folate
RC1_0122 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rce04147
]
RC1_0122 (pdhD)
Enzymes [BR:
rce01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RC1_0122 (pdhD)
Exosome [BR:
rce04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RC1_0122 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
NAD_binding_8
FAD_oxidored
FAD_binding_2
DAO
HI0933_like
FAD_binding_3
Lys_Orn_oxgnase
2-Hacid_dh_C
3HCDH_N
Thi4
AlaDh_PNT_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
ACI97571
UniProt:
B6IQ35
LinkDB
All DBs
Position
109239..110645
Genome browser
AA seq
468 aa
AA seq
DB search
MADTQFDLIVLGAGPGGYVAAIRAAQLGMKTAVVEREHLGGICLNWGCIPTKALLRTAEV
AHLIQHAKDYGITVEGPVRFDLAPIIKRSRQVAAQLSAGVKGLLKKNKVTVIDGSGRLLG
KGRLAVEKDGKPAGEYAAKHIIIATGARARVLPGLEPDGRLVWTYKEAMVPERMPKSILV
VGSGAIGVEFACFYRQMGVEVTLVEVLDRILPVEDEEISAIAAKQFTKQGIRIHTGTKVT
KLEKAADSVTATLDLGGGRTETVTVDRVIAAVGIVGNVEDIGLEATRVKVERNHIVTDAW
MRTDEPGVYAIGDVCGAPWLAHKASHEGVLCVEKIAGVQGVHPMDVRNIPGCTYSLPQVA
SVGLTERKAREAGHEVRVGRFPFIGNGKAIALGEPEGLVKTVFDARTGELLGAHMVGTEV
TELIQGYTIAKTMETTEAELMHTIFPHPTLSEMMHESVLAAYGRAIHY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgcagttcgatctgatcgtcctcggcgccggtcccggcggctatgtggcg
gcgatccgcgcggcccagctcggcatgaagacggccgtggtggagcgcgagcatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgcacggccgaggtg
gcgcacctgatccagcacgccaaggactacggcatcaccgtcgagggtccggtccgtttc
gatctcgcgcccatcatcaagcgctcccgccaggtggcggcgcagctctcggccggcgtg
aagggcctgctgaagaagaacaaggtcaccgtcatcgacggcagcggccggctgctgggc
aagggccgcctcgccgtcgagaaggacggcaagccggccggcgaatacgcggcgaagcac
atcatcatcgccaccggcgcccgcgcccgcgtcctgccgggcctggaaccggacggcagg
ctggtctggacctacaaggaggcgatggtccccgagcgcatgccgaagagcatcctggtc
gtcggttccggcgccatcggggtggagttcgcctgcttctaccgacagatgggcgtcgag
gtgacgctggtggaggtgctggaccgcatcctgccggtcgaggatgaggagatcagcgcc
atcgccgcgaagcagttcacgaagcagggcatccgcatccacaccgggaccaaggtcact
aagctggagaaggcggcggacagcgtgaccgccacgctggacctcggcggcggccggacc
gagacggtgaccgtggaccgcgtgatcgccgccgtcggcatcgtcggcaatgtcgaggac
atcgggctggaggcgaccagggtgaaggtggagcgcaaccacatcgtcacggacgcgtgg
atgcgcaccgacgagcccggagtctacgccatcggcgatgtctgcggcgcgccctggctg
gcgcacaaggccagccacgagggcgtgctctgcgtcgagaagatcgccggcgtgcagggc
gtgcatcccatggacgtgcgcaacatcccgggctgcacctactcgctgccgcaggtggcg
tcggtcgggctgacggagcgcaaggcgcgggaggccggccatgaggtccgtgtcggccgc
ttccccttcatcggcaacggcaaggccatcgccctgggcgagccggaggggctggtcaag
accgtcttcgacgccaggacgggcgagctgctgggcgcccacatggtcggcaccgaagtg
acggaactgatccagggctacaccattgccaagaccatggagacgacggaggcggagctg
atgcacaccatcttcccgcaccccacgctctccgaaatgatgcatgagagcgtgctggca
gcctacgggcgcgccatccactactga
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