Rhodospirillum centenum: RC1_1016
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Entry
RC1_1016 CDS
T00785
Name
(GenBank) diaminopimelate decarboxylase, putative
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rce
Rhodospirillum centenum
Pathway
rce00300
Lysine biosynthesis
rce00470
D-Amino acid metabolism
rce01100
Metabolic pathways
rce01110
Biosynthesis of secondary metabolites
rce01120
Microbial metabolism in diverse environments
rce01230
Biosynthesis of amino acids
Module
rce_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RC1_1016
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RC1_1016
Enzymes [BR:
rce01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RC1_1016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACI98439
UniProt:
B6ISK3
LinkDB
All DBs
Position
complement(1080647..1081915)
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AA seq
422 aa
AA seq
DB search
MTPDALAATSAAALPCAPALWWERPDLRYVGRDLHLAGRNLAELARQAGTPAYVYSGPRV
LENLRRLKAALESTGLPHAIRYAMKANRHGPLLTWMKASGLCGIDACSPNELRFAVQCGF
RPEEVSYTATSVSEADLAVLARHPETWVNADSLSTLRRLAAVSPGREIGIRVNPALGVGY
GENQLLRYSGERTSKFGIYRDRFEEALALAASHGLTVRGIHFHVGWGYLNAQLPAWAEVV
RECLWFLDRVPQARLVNLGGGLGVPHAAGDRPLDLEAWAAVIRDSFAGRGIEVWVEPGDY
VVKDAGVLLLQANTVERKRATTFVGVDGGFNLAVEPVFYRLPCEPVPARLHQDPARAWAA
DALAPVSIAGNINEALDLWAEALPFPAVEEGDVIAFLNAGGYAAAMGSNHCMRAQASEHL
LL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggatgccctcgcggcgacgtccgccgcggctcttccttgcgcgcccgcgctc
tggtgggagcggccggacctgcgctatgtcggccgcgacctgcacctcgccggccggaac
ctcgccgaactggcgcggcaggccggcacgccggcctatgtctattccggccctcgggtg
ctggagaatctgcggcggctgaaggcggcgctggagtccaccggactgccgcacgccatc
cgctatgccatgaaggcgaaccgccacggcccgctgctgacctggatgaaggcgtccggc
ctctgcggcatcgacgcctgctcccccaacgaactgcgcttcgccgtgcagtgcggcttc
cggccggaggaggtgtcctacaccgcgacctccgtctcggaggccgacctcgccgtgctg
gcgcggcatccggagacctgggtcaacgccgacagcctctccaccctccggcggctggcc
gccgtcagcccggggcgggagatcggcatccgggtcaacccggccctgggggtggggtac
ggggagaaccagcttctccgctacagcggcgagcgcacctccaagttcggcatctaccgc
gaccgtttcgaggaggcgctggcgctggccgcatcccacgggctcacggtccggggcatc
catttccatgtcggctggggctatctgaacgcccagcttcccgcctgggcggaggtggtg
cgcgaatgcctctggttcctggaccgggtgccgcaggcgcgcctcgtcaatctgggcggc
ggcctgggcgtgccgcatgcggccggcgaccggccgctggacctggaggcctgggccgcg
gtgatccgcgacagcttcgccggccgcggcatcgaggtctgggtcgagcccggcgactat
gtcgtcaaggatgcgggcgtgctgctgctccaggccaacacggtggagcgcaagcgcgcc
accaccttcgtcggcgtggatggcggcttcaatctggcggtggagcccgtgttctaccgc
ctgccctgcgagccggtgccggcccggctgcaccaggacccggcccgcgcctgggcggcg
gatgcgctggcccccgtcagcatcgccggcaacatcaacgaggcgctggacctctgggcc
gaggccttgcccttcccggcggtggaggagggcgacgtgatcgccttcctgaacgccggc
ggctacgccgcggccatgggctcgaaccactgcatgcgggcacaggcgagcgagcacctg
ctgctctga
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