Rhodospirillum centenum: RC1_1168
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Entry
RC1_1168 CDS
T00785
Symbol
holB
Name
(GenBank) ATPase i
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03030
DNA replication
rce03430
Mismatch repair
rce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RC1_1168 (holB)
03430 Mismatch repair
RC1_1168 (holB)
03440 Homologous recombination
RC1_1168 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rce03032
]
RC1_1168 (holB)
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_1168 (holB)
Enzymes [BR:
rce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RC1_1168 (holB)
DNA replication proteins [BR:
rce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RC1_1168 (holB)
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RC1_1168 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
AAA_25
Mg_chelatase
NACHT
nSTAND3
AAA_24
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
ACI98582
UniProt:
B6IMK3
LinkDB
All DBs
Position
1211427..1212545
Genome browser
AA seq
372 aa
AA seq
DB search
MSRPEDGGDDPFAPRRNPHLVGHEQAERLLLESWTSGRMHHAWLIGGPPGIGKATLAFRM
ARFVLKQGTGGNDAALFGAPPPPVTLAVDTEHPVARRIAAGGHADLLTVQRTWDEKRKRF
KRDLPVDEVRRIAPFLRLTSAEGGWRVVVVDGADQMNLSGQNALLKILEEPPARSLILMA
ADNVGSLLPTIRSRSRKLMLEPLPEATVVGLLGRYAPELDREAQTALARLAEGSIGRALD
LHHAGGLDLYRQMLGLLETLPRLDVLAAYGFIDKVLRGNDDAAWSAVTDLLVWWLGRLAR
TTARGQLPGEVVAGEGPLIARLVEPARRDGGLDRWVEVWENTTRLFARADSANLDRRQVL
LNALLSIETAAA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtccggaggatggcggggacgatcccttcgcgccccgccgtaatccccatctg
gtgggacatgagcaggcggaacggctgctgctggaaagctggacctccggccgcatgcat
catgcctggctgatcggtggtccccccggcatcggcaaggccacgctggccttccgcatg
gcccggttcgtgctgaagcaggggacgggcggaaacgacgccgccctgttcggcgcaccg
ccgccgccggtgaccctcgccgtggacacggagcatccggtcgcccgacggatcgccgcc
ggcggtcatgccgacctgctgaccgtgcagcggacctgggacgagaagcgcaagcggttc
aagcgcgacctgccggtggacgaggtccgccgcatcgcccccttcctgcgcctgacgtcg
gcggaagggggctggcgcgtcgtcgtcgtggacggggccgaccagatgaacctcagcggc
cagaacgcgctgctgaagatcctggaggaaccgccggcccggtcgctgatcctgatggcg
gcggacaatgtcggcagcctgctgccgaccatccgttcacgctcacgcaagctgatgctg
gagccgctgcccgaggcgacggtcgtcggcctgctgggccgctatgcgccggagctggac
cgggaggcgcagacggcccttgcccgtctggccgagggcagcatcggccgcgcgctcgac
ctgcaccatgcgggcggtctggatctctaccgccagatgctgggcctgctggagacgctg
ccccggctggatgtgctggccgcctacggcttcatcgacaaggtgctgcgcggcaatgac
gacgctgcctggagcgcggtgacggacctgctggtctggtggctggggcggctggcccgc
acgacggcgcggggccagcttccgggcgaggtggtggcgggcgaggggccgctgatcgcc
cgtctggtggagcccgcccgtcgggacggcggtcttgatcgctgggtggaggtgtgggag
aacacgacccgcctgttcgcccgggcggattccgccaacctggaccgccggcaggtcctg
ctcaacgcgctgctgtcgatcgagacggccgcggcctga
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