Rhodospirillum centenum: RC1_2036
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Entry
RC1_2036 CDS
T00785
Name
(GenBank) UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03420
Nucleotide excision repair
rce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RC1_2036
03430 Mismatch repair
RC1_2036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_2036
Enzymes [BR:
rce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RC1_2036
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RC1_2036
MMR (mismatch excision repair)
Other MMR factors
RC1_2036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Intein_splicing
AAA_30
PcrA_UvrD_tudor
UvrD_C_2
Hint_2
Hom_end_hint
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACI99429
UniProt:
B6IP09
LinkDB
All DBs
Position
complement(2093587..2097123)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSDLFSDPPPTGRPASTAPSATTPASVPVPAAGAEPAYLAGLNPAQREAVEALDGPVLVL
AGAGTGKTRVLTTRLAHLLVTRRAGPWNILTVTFTNKAAREMRERVEALVGVPTEGWWMG
TFHALAARILRRHAELVGLKPSFTILDTDDQIRLLKQLMEAENIDSKKWPARVLLGAIER
WKDKALTPDRLKREDAGDMAGGRLIDLYRQYQDRLLSLNACDFGDLLLHNIALFQKHNDV
LREYQDRFRYILVDEYQDTNVAQYLWLRLLAQAHRNICCVGDDDQCLVAGTLIRMADGSE
RPIETVGAGDAVLSARGGGACGASVVSRTYARSYSGDLVTVELEDGTRLVSTPEHRHFAG
YRLGVTPQLYFTYLMHKRGYGFRLGTSQTYTRARIEPVLGYELRCRQEHADAVWVLAVHG
SENEARFLEYTLSLDYGIPTFPFVARKGGSTAGLVHDQSILDRLFKERPTETAGEAVLTR
FGLSRDYPHYRPQAHTGRRRNVTVTLCGDNRAAAALHRISVIGSDPDDAAVLASLGLSIR
PSKKSNPGWRYETAMADLGRIMATVEQIRRAFDGDVALVQFGRFGAGGEAGTDLDPGPAP
DDGELLTAAPAPARVRSSLPMIPAGSVRPGMAMFRADGGLAIVRSVRTEPGVATVHDIDV
SRTHNFIANGIITHNSIYGWRGAEVGNILRFDHDFTGARVIRLEQNYRSTAHILGAAHGI
IANNQGRLGKQLWTEVDGGEKVRVRGLWDAEEEARWVGDEIEALQRKGLSLGQMAVLVRA
GFQTREFEERFITLGLPYRVIGGPRFYERQEIRDALAYLRIVAQPDDDLAFERIINVPKR
GIGDATLRQLYVAARTLGVSLAEATWRLTETDELRGKVRSTLRALMEDIARWRGQIDRTP
HTDLAQAILDESGYTRMWQQDKSPEAPGRLENLKELINAMGEFENLTGFLEHVALVMDNA
EASGLEQVSLMTLHGAKGLEFDVVFLPGWEEGLFPSQRTLDENGIAGLEEERRLAYVGIT
RGRIRVHVSHAANRRIHGSWATSLPSRFVDELPAEHVEVENAPGIGGAGFGSGGFGSGGF
GGASAGGGWSGFGDRFNRMGRQAAQAPARGRVIEGTACQVAPRSRPDRPFNPGSRVFHQK
FGYGTVVAVENDKLEIKFDATGVKKVMDSFVVPAEQAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcttctccgatccgcccccgaccggccggcctgccagcacggcgccgtcc
gcgacgacgcccgcctccgttcccgtgcccgcagccggtgccgagccggcctatctcgcc
ggcctgaacccggcgcagcgcgaggcggtggaggcgctggacgggccggtgctggtgctg
gcgggggcgggaaccggcaagacccgggtcctgaccacccggctggcccacctgctggtg
acgcgccgggccggcccgtggaacatcctgacggtgaccttcaccaacaaggccgcgcgg
gagatgcgcgagcgcgtggaggcgctggtcggcgtgcccaccgagggctggtggatgggc
accttccacgcgctcgccgcgcgcatcctgcgccgccatgccgaactggtcgggctgaag
cccagcttcaccatcctggacaccgacgaccagatccgcctgctgaagcagctcatggag
gcggagaacatcgactccaagaaatggccggcgcgcgtcctgctgggcgccatcgagcgc
tggaaggacaaggcgctgacccccgaccggctgaagcgcgaggatgccggcgacatggcc
ggcggccgcctgatcgacctctaccgccagtaccaggaccggctgctgagcctgaacgcc
tgcgacttcggcgacctgctgctgcacaacatcgccctgttccagaagcacaacgacgtc
ctgcgggagtatcaggaccgcttccgctacatcctggtggacgagtaccaggacaccaac
gtcgcccagtacctctggctccgcctgctggcccaggcgcaccggaacatctgctgcgtc
ggggatgacgaccagtgccttgtggcgggaacgctgatccgcatggcggacgggagcgaa
cggcccatcgagaccgtgggggccggggatgccgtcctgtcggcccgggggggcggggcg
tgcggcgcttccgtcgtctcccgcacctatgcgcggagctacagcggcgatctggtgacg
gtggaactggaggacggaacacggctcgtcagcacgccggagcaccggcatttcgccggt
taccggctcggcgtcacgccgcagctctacttcacctatctcatgcacaagcgggggtac
ggtttccggctgggcacctcgcagacctacacccgcgccaggatcgagcccgttctgggc
tatgaactgcggtgccggcaggagcatgccgacgcggtctgggtcctggcggtccacggt
tccgagaacgaggcccggttcctcgaatacaccctctcgctggattacggaatcccgacc
ttcccgttcgtcgcccgcaagggcggatcgaccgccggcctcgtccacgaccagtcgatt
ctggaccgtctgttcaaggagcggccgacggagacggccggggaggcggtgctcacccgc
ttcggcctttcccgggactatccccattaccggccgcaggcccatacgggccggcggcgg
aacgtgaccgtgacgctctgtggcgacaaccgggccgcggcggctctccaccgtatctcg
gtcatcggcagcgacccggacgacgcggccgtcctggcctcgctcgggctttcgatccgc
ccgtccaagaagagcaatccgggctggcggtacgagacggccatggccgacctcggacgc
atcatggcaacggtcgagcagatccggcgggccttcgacggtgacgtggccctcgttcag
ttcggtcgcttcggggctggcggggaggccgggaccgacctggaccctggcccggcgccg
gacgatggcgaattgctgacagcggcgcccgcgccggcgcgcgtccggtcgagcctcccg
atgatcccggccggttccgtccggcctgggatggcgatgttccgggccgatggcgggctc
gccatcgtccgttccgtgaggacggaaccgggggtggcgaccgtccatgacatcgacgtc
agccggacccacaacttcatcgccaacggcatcatcacccacaattcgatctacggctgg
cgcggggcggaggtggggaacatcctgcgcttcgaccacgatttcaccggcgcccgcgtg
atccggctggagcagaactaccgctccaccgcgcacatcctgggggcggcgcacggcatc
atcgccaacaaccagggccggctgggcaagcagctctggaccgaggtggacggcggcgag
aaggtgcgggtccgcggcctctgggacgcggaggaggaggcgcgctgggtcggggacgag
atcgaggcgctgcaacgcaagggcctgtcgctcggccagatggcggtgctggtgcgcgcc
ggcttccagacccgcgagttcgaggagcgcttcatcaccctgggcctgccctaccgggtg
atcggcggcccgcgcttctacgagcggcaggagatccgcgacgccctggcctatctgcgc
atcgtcgcccagcccgacgacgatctggccttcgagcgcatcatcaacgtgcccaagcgc
ggcatcggcgacgccacgctgcgccagctctacgtcgccgcgcgcacgctgggcgtttcg
ctggccgaggccacctggcggctgacggagacggacgagctgcgcggcaaggtccgcagc
accctgcgcgccctgatggaggacatcgcgcgctggcgcggccagatcgaccgcacgccc
cacaccgatctggcccaggccatcctggacgagagcggctacacccgcatgtggcagcag
gacaagtcgcccgaggcgccgggccggctggagaacctgaaggaactgatcaacgccatg
ggcgagttcgagaacctgaccgggttcctggagcacgtcgccctggtgatggacaatgcc
gaggcgtccgggctggagcaggtcagcctgatgaccctgcacggcgccaaggggctggag
ttcgatgtcgtcttcctgcccggctgggaggaggggctgttcccctcgcagcggacgctg
gacgagaacggcatcgccgggctggaggaggagcggcggctggcctatgtcggcatcacc
cgcggccgcatccgcgtccatgtcagccacgccgccaaccggcgcatccacggctcctgg
gcgacctccctgccgtcgcgcttcgtggacgagctgccggccgagcatgtcgaggtggag
aacgcccccggcatcggcggcgccggcttcgggtccggcggattcggctccggcgggttc
gggggggcatcggcgggcggcggctggtccggtttcggcgaccgcttcaaccgcatgggc
cggcaggcggcgcaggcgccggcgcgcggccgggtgatcgagggcaccgcctgtcaggtg
gcgccgcgctcccgccccgaccggcccttcaatccgggctcccgcgtcttccaccagaaa
ttcggttacggcaccgtggtggccgtggagaacgacaagctggagatcaagttcgacgcc
acgggcgtcaagaaggtgatggacagcttcgtcgtgcccgccgaacaggcaggctga
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