Rhodospirillum centenum: RC1_2306
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Entry
RC1_2306 CDS
T00785
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau, putative
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03030
DNA replication
rce03430
Mismatch repair
rce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RC1_2306 (dnaX)
03430 Mismatch repair
RC1_2306 (dnaX)
03440 Homologous recombination
RC1_2306 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rce03032
]
RC1_2306 (dnaX)
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_2306 (dnaX)
Enzymes [BR:
rce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RC1_2306 (dnaX)
DNA replication proteins [BR:
rce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RC1_2306 (dnaX)
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RC1_2306 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_19
AAA_18
AAA_assoc_2
AAA_24
nSTAND3
TsaE
SRP54
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ACI99693
UniProt:
B6IPJ1
LinkDB
All DBs
Position
complement(2378391..2380313)
Genome browser
AA seq
640 aa
AA seq
DB search
MTDTTLVPDTEAAAPAPAAGAAYRVLARKYRPQSFDELVGQDALVRTLRNAIQSGRIHQA
YMLTGVRGVGKTTTARIIARALNCVGPDGKGGPTITPCGVCEQCRSIAADRNVDVLEMDA
ASNTGVDNIREIIDGVRYAPAAARYKLYIIDEVHMLSKGAFNALLKTLEEPPPHVKFVFA
TTEIRKVPITVLSRCQRFDLRRVDQGTLVGHFTRIAGKEGVEADAEAISLIARAADGSVR
DGLSLLDQAIALGSGRVTAEQVRDMLGLADRGLIVDLFEAAMAARPADALGVLDGLHRRG
ADPVVIVQDLLDFTHFLTRTRVVPGTAEDPAIPETERTRGVALAGALGMPALTRAWQILL
KGLGEVQQAPVPMQALEMVVIRLAYASELPTPGDLLKKIQEAGGAEAAARALSAGPAGGG
GGPRALAAAAPLAALSAPAPLGLAVGAPAGAVPQPAEARAPDAAPAALADPRDFADVVAL
FNERREARIAADLETLVHLVRFEPGLIEFRPEPQAPHNLPGRVGQLLTEWTGRRWVVSVS
GAPGQPTLREKARAAEAEVRRQVEAHPLVQAVLLAFPGARIETIRDLAQEAAQQAAQAAL
AAPPAPPEDDAGGDDGDMPPDNPYFDAPPSMDDGDWEGDF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgacgctcgtgcccgacaccgaagccgccgccccggcccctgccgccgga
gccgcctaccgcgtgctggcacgcaagtaccgaccgcagtccttcgacgagctggtgggc
caggatgcgctggtccgcacgctgcgcaacgccatccagtcgggccgcatccatcaggcc
tacatgctgaccggggtgcgcggggtgggcaagaccaccaccgcccgcatcatcgcccgc
gccctgaactgcgtcggcccggacggcaagggcggtcccaccatcacgccctgcggcgtc
tgcgagcagtgccgctccatcgccgccgaccgcaatgtcgatgtgctggagatggacgcc
gccagcaacaccggcgtggacaacatccgcgagatcatcgacggcgtgcgctacgctccg
gcggcggcgcgctacaagctctacatcatcgacgaggtccacatgctgtccaagggcgcg
ttcaacgcgctcctgaagacgctggaggaaccgccgccgcatgtgaagttcgtcttcgcc
acgaccgagatccgcaaggtgccgatcacggtgctgtcgcgctgccagcggttcgacctg
cgccgggtggatcagggcacgctggtcggccacttcacccgcatcgccggcaaggagggg
gtggaggccgacgccgaggccatctccctgatcgcccgtgccgccgacgggtcggtgcgc
gacgggctgtcgctgctggaccaggcgatcgcgctgggctccggccgggtgacggcggag
caggtgcgcgacatgctcggccttgccgaccgcggcctgatcgtggacctgttcgaagcc
gccatggcggcgcggccggcggacgcgctgggcgtgctggacgggctgcaccggcgcggc
gccgatccggtggtgatcgtccaggacctgctggacttcacccatttcctgacccgcacc
cgggtggtccccggcacggccgaggaccccgccatccccgagacggaacgcacccgcggc
gtcgccctggccggggcgctgggcatgcccgccctgacccgcgcctggcagatcctgctc
aaggggctgggggaggtgcagcaggccccggtgcccatgcaggcgctggagatggtggtg
atccgccttgcctacgcctccgagctgccgacgccgggcgacctgctgaagaagatccag
gaggccggcggggccgaggcggcggcgcgggcgctgtcggcgggacctgccggcggtggc
ggcgggccgcgggctctggccgcggcggctcccctggcggcgctgtccgccccggcgccg
ctgggccttgccgtcggtgcgccggccggggccgtgccgcagccggcggaggcccgggcg
cccgacgccgcccctgccgcgctggccgacccgcgcgacttcgccgacgtcgtcgccctc
ttcaacgagcggcgcgaggcccgcatcgccgcggacctggagacgctggtgcatctggtc
aggttcgagcccggcctgatcgagttccgcccggagccgcaggcgccgcacaatctgccc
ggccgcgtcggccagcttctgacggaatggaccgggcggcgctgggtggtgtccgtctcc
ggcgcgccgggccagccgaccctgcgggagaaggcccgtgccgccgaggccgaggtccgc
cggcaggtggaggcgcatcccctggtccaggcggtgctgctcgccttccccggggcgcgg
atcgagacgatccgcgatctggcgcaggaggcggcgcagcaggcggcccaggccgcgctc
gcggccccgcccgccccgccggaggacgatgccggcggcgacgatggtgacatgccgccc
gacaacccttatttcgacgctccgccgtccatggacgatggcgattgggaaggagatttc
tga
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