Rhodospirillum centenum: RC1_2426
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Entry
RC1_2426 CDS
T00785
Name
(GenBank) peptidoglycan binding domain protein, putative
KO
K21470
L,D-transpeptidase YcbB
Organism
rce
Rhodospirillum centenum
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rce01002
]
RC1_2426
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rce01011
]
RC1_2426
Peptidases and inhibitors [BR:
rce01002
]
Cysteine peptidases
Family C82
RC1_2426
Peptidoglycan biosynthesis and degradation proteins [BR:
rce01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RC1_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACI99810
UniProt:
B6IUI5
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All DBs
Position
2502658..2504448
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AA seq
596 aa
AA seq
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MRTVMRPLAALAMVVAAVVAVLDGGAVAAGTPDQARPEQTRPEQARPEQTRLEQALQQRL
LTGVGVRGGEREGEDLMQLGRFYDGRASAPVWIADGRPSPRAHLLYAALAAAAEDGLDPR
RYGVQRLGALLEHGDSPDALAELEVLLSRGALLFGRDLAAGRLDPSRIDPELIVERQEPD
PQALLRQVAEAADPGGAVRAMAPARPEYRRLRAALAAYRTLAAAGGWLAVPTGGETLKPG
QSDPRVPALRARLAATGELSPAAPAPADPQFYDPALEAAVRLFQSRNGLEPDGAVGRQSV
AALNVTAQQRVTQIEINMERWRWLPADLGPSYLIVNLAAFELAVFEGDRPVHTARIVVGA
PFTRTPVFSESMTYLELNPYWNVPPSIARDEIFPKARKDPGYLARRGYELLSDWSETAVP
VDPATVDWRHGNLNRYKVRQKPGDTNSLGRIKFMFPNRFNVYLHDTPSKRLFERANRTFS
HGCMRVENPLDLAETVLRLTGTTGWDRARLDAAIAGDQRQVVRLRRPLPVHVTYVTAFVE
EDGTVAFRPDIYGRDTTLAAALAAPQGRQQAPPRAPAAARTGMAKPGAEGAGPVAE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcggacggtgatgcggcccctggcggccctggcgatggtggtcgcggcggtggtcgcg
gtcctggatggcggggcggtcgcggcgggaacgccggatcaggcccggcccgaacagacc
cggcccgaacaggcccgccccgaacagacccgactggagcaggcgctgcaacagcgcctg
ctgaccggcgtcggcgtccggggcggcgagcgcgagggcgaggatctgatgcagctcggc
cgcttctatgacggccgcgcctccgcccccgtctggatcgcggacggccgcccctccccc
cgcgcccacctgctgtacgccgccctggccgcggcggcggaggacgggctggacccgcgg
cgctacggcgtgcagcgcctgggcgccctgctggagcacggcgattcccccgacgcgctg
gccgaactggaagtcctgctgagccgcggcgccctgctgttcggccgcgacctcgccgcc
ggccggctggacccgtcgcgcatcgaccccgaactgatcgtggagcggcaggagccggac
ccgcaggcgctgctgcgtcaggtggcggaggccgcggacccgggcggggccgtccgggcc
atggcgccggcacggcccgaataccggcgcctgcgcgcggcgctggccgcctaccgcacc
ctggccgcagccgggggctggctcgccgtgcccacgggcggggagacgctgaagccgggc
cagagcgatccgcgggtgcccgccctgcgcgcccggctggcggcgacgggggaactgtcg
ccggccgccccggccccggccgacccgcagttctacgaccccgccctggaggcggcggtg
cgcctgttccagagccgcaacgggctggagccggacggggccgtgggacggcagtcggtg
gcggcgctgaacgtgacggcgcagcagcgggtgacgcagatcgagatcaacatggaacgc
tggcgctggctgccggcggacctggggccgagctacctgatcgtcaatctggccgccttc
gagctggcggtgttcgagggcgaccggccggtccacaccgcccgcatcgtcgtcggcgcg
cccttcacccggacgccggtgttcagcgagtcgatgacctatctggagctgaacccctac
tggaacgtgccgccgagcatcgcgcgggacgaaatcttccccaaggcccgcaaggatccg
ggctatctggcccggcgcggctacgagctgctgtccgactggtcggagacggcggtgccg
gtcgatcccgcgaccgtggactggcgccacggcaacctgaaccgctacaaggtgcggcag
aagcccggcgacaccaattcgctgggccgcatcaagttcatgttccccaaccgcttcaac
gtctacctgcacgacacgccgtccaagcggctgttcgagcgggcgaaccgcaccttcagc
cacggctgcatgcgggtggagaacccgctggatctggccgagacggtgctgcgcctgacc
gggaccacgggctgggaccgcgcccggctggacgccgccatcgccggcgaccagcggcag
gtggtgcggctgcgccggccgctgccggtccatgtcacctatgtcaccgccttcgtggag
gaggacggcacggtcgccttccggcccgacatctacggccgcgacaccacgctggccgcg
gcgctggccgctccgcaggggcggcagcaggcgcccccgagagcccccgccgccgccagg
acaggcatggcgaaaccgggcgccgagggggccggtccggttgcggaatga
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