Rhodospirillum centenum: RC1_2919
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Entry
RC1_2919 CDS
T00785
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase, putative
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC1_2919 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rce03019
]
RC1_2919 (pnp)
03016 Transfer RNA biogenesis [BR:
rce03016
]
RC1_2919 (pnp)
Enzymes [BR:
rce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RC1_2919 (pnp)
Messenger RNA biogenesis [BR:
rce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RC1_2919 (pnp)
Transfer RNA biogenesis [BR:
rce03016
]
Prokaryotic type
tRNA degradation factors
RC1_2919 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
ACJ00287
UniProt:
B6IVG3
LinkDB
All DBs
Position
2997486..2999609
Genome browser
AA seq
707 aa
AA seq
DB search
MFKVFRKEMMWGGRKLVLETGKVARQADGAVWASYGDTVVLATAVAAKAPKPGVDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPTEKEVLTSRLIDRPIRPLFADGYRNETQVIVTVLSH
DLENDPDIVAMVATSAALTISGIPFLGPIGAARVGYKDGQFVLNPTLEQVEASDLDLVVA
GTTEGVLMVESEAKELPEDVMLGAVMFGHREFQPVIDLIIDLAEMAAKDPMAIPAPAYDK
DAVKTRMAALIGQDVRQAYTLTVKQERYAAIGAAKLKALETMVAEGTAPEAVASVFKELE
SDILRGSVIETGKRIDGRTTVDIRPIVSQVGVLPRAHGSALFTRGETQALVVATLGTNQD
EQIVDALEGEYRESFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVRPLLPTKETF
PYTIRVVSEITESNGSSSMATVCGSSLSMMDAGVPLPRPVAGIAMGLIKEGEKFAVLSDI
LGDEDHLGDMDFKVAGTEKGVTALQMDIKITSITEEIMKIALAQAKDGRVHILSEMNKAL
NTAREAVNQNAPRITVINIPKDKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVAAVD
GKASEAAIKWIKGIVAEPEVGEIYEGKVVKIMDFGAFVNFLGSRDGLVHISELKNERVAK
VTDVVKQGDAVKVKVLGFDDRGKVKLSMKVVDQTTGEDLSKKEEAEG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggttttccgcaaggaaatgatgtggggcgggcggaagctcgttctggagacg
ggcaaggtcgcccgtcaggccgacggggccgtgtgggccagctacggcgacacggtggtt
ctggccaccgcggtggccgccaaggccccgaagccgggcgtggacttcttcccgctgacg
gtcaactaccaggagaaggccttcgccgcgggcaagatccccggcggcttcttcaagcgc
gaagggcgcccgacggagaaggaggtcctgacctcccgcctgatcgaccggccgatccgt
ccgctgttcgcggacggctaccgcaacgagacccaggtcatcgtcaccgtcctgtcccac
gaccttgagaacgatcccgacatcgtcgccatggtcgccacctccgccgcgctgaccatc
tcgggcatcccgttcctgggaccgatcggcgccgcccgcgtcggctacaaggacggccag
ttcgtcctgaacccgacgctggagcaggtcgaggccagcgatctcgacctcgtcgtcgcc
ggcaccaccgaaggcgtgctgatggtggagtccgaggcgaaggaactgcccgaggacgtg
atgctgggggccgtgatgttcggccaccgcgagttccagccggtcatcgacctgatcatc
gacctcgccgagatggcggccaaggacccgatggcgatcccggcgccggcctacgacaag
gacgcggtgaagacccgcatggccgccctgatcggccaggacgtccgtcaggcctacacg
ctgaccgtgaagcaggagcgctacgccgccatcggcgccgccaagctgaaggcgctggag
acgatggtcgccgagggcaccgcgcccgaggccgtggccagcgtcttcaaggagctggag
agcgacatcctgcgcggcagcgtgatcgagaccggcaagcgcatcgacggccgcaccacg
gtggacatccgtcccatcgtctcgcaggtcggcgtgctgccccgcgcccacggctcggcc
ctgttcacccgcggcgagacgcaggccctggtggtcgccacgctgggcacgaaccaggac
gagcagatcgtcgacgcgctggaaggcgagtaccgtgagagcttcatgctccactacaac
ttcccgccctacagcgtgggcgaggccggccgcatgggcagcccgggccggcgcgagatc
ggccacggcaagctggcttggcgcgccgtccggccgctgctgccgaccaaagagaccttc
ccctacacgatccgcgtcgtgtcggagatcaccgagtcgaacggctcctcctccatggcc
acggtctgcggcagctcgctgtcgatgatggacgccggcgtgccgctgccgcggccggtg
gcgggcatcgccatgggcctgatcaaggaaggcgagaagttcgccgtgctgtccgacatc
ctcggtgacgaggaccatctgggcgacatggacttcaaggtcgccggcaccgagaagggc
gtcaccgcgctccagatggacatcaagatcacctcgatcaccgaggagatcatgaagatc
gccctggcccaggccaaggacggtcgcgtccacatcctgagcgagatgaacaaggcgctg
aacacggcgcgcgaggcggtcaaccagaacgcgccgcgcatcaccgtgatcaacatcccg
aaggacaagatccgcgacgtgatcggctccggcggcaaggtgatccgcgagatcgtcgag
cagaccggcgccaagatcgacatcgaggacgacggcaccgtcaaggtcgccgccgtggac
ggcaaggcgtccgaggccgcgatcaagtggatcaagggcatcgtcgccgaacccgaggtg
ggcgagatctacgagggcaaggtcgtcaagatcatggacttcggcgccttcgtgaacttc
ctcggcagccgggacggcctcgtccacatctccgagctgaagaacgagcgcgtcgccaag
gtcaccgacgtcgtgaagcagggcgacgccgtgaaggtgaaggtcctgggcttcgacgac
cgcggcaaggtgaagctgtccatgaaggtcgtggaccagacgaccggcgaggacctgtcc
aagaaggaagaggccgagggctga
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