Rhodospirillum centenum: RC1_3183
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Entry
RC1_3183 CDS
T00785
Name
(GenBank) uracil-DNA glycosylase, family 4 protein, putative
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RC1_3183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_3183
Enzymes [BR:
rce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RC1_3183
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RC1_3183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACJ00547
UniProt:
B6IW73
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All DBs
Position
3275959..3276855
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AA seq
298 aa
AA seq
DB search
MIELGQSVAALRFLAEIGADEAVNDRPTDWTAIAARGRAVGPETDRPSAAVPPRAPGPAR
PGAARPAASGPATAGAVSASPPPLGAAESSQTARAAAAAAATLPELKAALAAFEGCALRH
TATSLVFADGDPAARVMLVGEAPGEQEDRQGRPFVGPAGLLLDRMLAAIGLDRRADTPDR
AVYITNVVNWRPPGNRSPTDGEIAACLPFVQRHIDLVNPAVLVFLGGISAKSLLQRTEGI
TRLRGRWFDYASPGLSRPLPALPMLHPAYLLRNPAAKREAWKDLLALQERLEALDAGR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgattgaactggggcagagtgtcgcggccctccgctttctggcggagatcggggccgac
gaggcggtgaacgaccggccgacggactggacggcgatcgccgcccgcgggcgtgccgtc
gggccggagacggaccgtccgtccgctgccgtgccgccccgcgctcccggcccggcccgg
cccggggccgcccgccccgccgcttccggtccggccaccgccggggccgtgtccgcgtcg
ccgccgccgctgggagcggcggaatcctcccagaccgcccgtgccgcggccgccgcggcc
gccaccctgccggagctgaaggcggcgctcgccgcgttcgagggctgcgcgctccgccac
accgccaccagtcttgtcttcgccgacggcgatccggcggcgcgggtgatgctggtgggg
gaggcgccgggcgagcaggaggaccggcagggccggcccttcgtcgggccggccggcctg
ctgctggaccggatgctggccgccatcgggctcgaccgcagggcggacacgcccgaccgg
gccgtctacatcacgaacgtggtaaactggcggccccctggaaaccgcagcccgacggac
ggggagatcgcggcctgcctgcccttcgtgcagcgccatatcgacctggtgaacccggcg
gtgctggtcttcctcggcggcatcagcgccaagtccctgctgcagcggacggagggcatc
acccgcctgcgcgggcgctggttcgactacgccagccccggcctgtcccggccgctgccg
gccctgccgatgctgcatcccgcctatctgctgcgcaatccggccgccaagcgggaggcg
tggaaggatctgctggcgttgcaggagcggctggaggcgctggacgccggccgctga
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