Rhodospirillum centenum: RC1_3609
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Entry
RC1_3609 CDS
T00785
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit, putative
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RC1_3609 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_3609 (xseA)
Enzymes [BR:
rce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RC1_3609 (xseA)
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RC1_3609 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
ACJ00958
UniProt:
B6IXD4
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All DBs
Position
3737563..3739134
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AA seq
523 aa
AA seq
DB search
MSYDPADLPPRTGSNLPEMSVGDLARALKRTVEDAYGYVRVRGEISQPKRHSSGHVYLRL
KDETAVLEAVCWKGVAARLSVRPEEGMEVVCTGRLTTYPGRSQYQLVIETMELAGEGALL
KMLEERKRRLAAEGLFAPERKKPLPFLPEVIGVVTSPTGAVIRDILHRLADRFPRHVLLW
PVAVQGEGAADQVARAIAGFNAIAPGGPVPRPDLIIVARGGGSLEDLMPFNEEAVVRAAA
ASAIPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLAQVLDDGRRLHQCLS
RAIDTRRSHVEGLGRGLGDPRALLEGCIQRLDDRAERLELSLRTGLERRHAAVQQLGIRL
RHPREVIGLAAARADAAGRALRAGFDRAVTVEQGRFHRVADRLSPLPLRRQIDAGRDRLD
ALPPRLAQAHARRLDQAGQRLVALGQLLESYSYKGVLERGFVLVADAEGRPVTRAADTAP
GQPVALRFADGTVGAVVDGAAPGASPAARTRAGKAKADQGSLF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgatccggccgacctgccgccccgcaccggctccaacctgccggagatgtcg
gtgggcgatctcgcccgcgcgctgaagcgcacggtggaggacgcctacggctatgtccgc
gtccgcggcgagatcagccagccgaagcgccacagctccggccatgtctatctgcgtctg
aaggacgagacggcggtgctggaggccgtctgctggaaaggcgtggccgcccggctctcc
gtccggcccgaggaggggatggaggtggtctgcaccggccgcctgaccacctatcccggc
cgcagccagtaccagctcgtgatcgagacgatggagctggcgggggagggggcgcttctc
aagatgctggaggagcgcaagcgccgactggcggcggaggggctgttcgcgcccgagcgc
aagaagccgctgcccttcctgcccgaggtgatcggtgtcgtcaccagccccacgggggcg
gtgatccgggacatcctgcaccggctggccgaccgctttccccgccatgtcctgctctgg
ccggtggcggtgcaaggggagggggcggcggatcaggtggcccgcgccatcgccggcttc
aacgccatcgcccccggcggcccggtgccgcggccggacctcatcatcgtggcgcggggc
ggcggcagcctggaagacctgatgcccttcaacgaggaggcggtggtgcgcgcggccgcg
gccagcgccatccccctgatctccgccgtcgggcacgagacggacacgacgctgatcgac
ttcgcgtcggaccggcgcgcgccgacccccaccgcggcggcggagatggcggtgccggtc
cggaccgagctgctggcgcaggtgctggacgatggccgtcggctgcaccagtgcctgtca
cgggcgatcgacacccgccgcagccatgtggaggggctgggccggggcctgggcgatccg
cgcgccctgctggaggggtgcatacagcgcctggacgaccgggccgagcgtctggagctg
tcgctgcgcacggggctggagcgccggcacgcggccgtgcagcagctcggcatcaggctg
cgccacccgcgtgaggtgatcggccttgccgctgcccgggccgacgccgctggccgcgcg
ttgcgcgccggcttcgaccgggccgtgaccgtggagcaggggcgcttccaccgggtggca
gaccgtctgtccccgctgccgttgcgccggcagatcgacgccggccgggaccggctggat
gctctgccgccccggctggcccaggcccatgcccggcgcctggatcaggcggggcagcgg
ctcgtggcgctgggccagctcctggagagctacagctacaagggcgtgctggaacgcggc
ttcgtcctggtcgccgatgccgaggggcgtcccgtcacccgcgccgccgacaccgccccc
ggccagccggtggcgctgcgcttcgccgacggcaccgtcggcgcggtggtggatggcgcg
gctccgggagcgtctccggccgcgaggacgcgggccggcaaggcaaaagcggaccagggc
agcctgttctga
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