Rhodospirillum centenum: RC1_3955
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Entry
RC1_3955 CDS
T00785
Name
(GenBank) Uracil DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rce
Rhodospirillum centenum
Pathway
rce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RC1_3955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rce03400
]
RC1_3955
Enzymes [BR:
rce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RC1_3955
DNA repair and recombination proteins [BR:
rce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RC1_3955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Hrs_helical
iHD-CE
SH3_16
Motif
Other DBs
NCBI-ProteinID:
ACJ01297
UniProt:
B6IYC3
LinkDB
All DBs
Position
complement(4158788..4159480)
Genome browser
AA seq
230 aa
AA seq
DB search
MPPRAPPDTAARFLPPARTIPALREAAAGCTACPLHETGTRTVFGEGPERARLVLVGEQP
GDREDAQGRPFVGPAGQLMDLALNAAGIDRTGIYVTNAVKHFKWVQRGHRRLHEKPGRLE
ILACLPWLENEIAAIAPEGIVCLGATAAQALIGRTFKVTEERGQFLRTPLAGWITATVHP
SSLLRIEDRETQRAAYERFVDDLARIADRLAGRSRSDEPARMGMGQGRLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgcgcaccgcccgatacagcggcccgcttcctgccgccggcccgcaccatc
cccgccctgcgcgaggccgcggcgggctgcaccgcctgtccgctgcacgagaccggcacc
cggaccgtgttcggggaggggccggagcgggcgcggctggtgctggtcggggaacagccg
ggcgaccgggaggacgcccaggggcgccccttcgtcggtccggcaggacagctcatggac
cttgccctgaacgcggccgggatcgaccgcaccggcatctacgtcaccaacgcggtcaag
cacttcaaatgggtgcagcggggccaccgccggctgcacgagaagcccggacggctggag
atcctggcctgtcttccctggctggagaacgagatcgccgccatcgcaccggagggcatc
gtctgcctgggcgccacggcggcgcaggccctgatcggccggaccttcaaggtgacggag
gaacgcggccagttcctgcgcacgccgctggcgggctggatcacggcgacggtgcatccg
tcgtcattgttgcggatcgaggaccgggagacgcagcgggcggcctacgaacgcttcgtg
gacgacctggcccggatcgccgaccggctggccgggcggagcaggagcgatgaacccgcc
cgcatggggatggggcaaggccgcctgctgtag
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