Rosistilla carotiformis: Poly24_04390
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Entry
Poly24_04390 CDS
T09894
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rcf
Rosistilla carotiformis
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcf03016
]
Poly24_04390 (truD)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Poly24_04390 (truD)
Transfer RNA biogenesis [BR:
rcf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Poly24_04390 (truD)
Prokaryotic type
Poly24_04390 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
bDLD3
Motif
Other DBs
NCBI-ProteinID:
QDV66751
UniProt:
A0A518JMI2
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All DBs
Position
580238..581260
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AA seq
340 aa
AA seq
DB search
MNPIDPPRLLGPSLGSVIFKSQPEDFEVEELLRFEPSGEGEHCLVWLEKRHRNTNDVASE
LATKLGLRKRLISHCGLKDKEAVTRQWFSLHLPGKPSPSAEDLTVEGVRVLRIVRHLRKL
HRGAHDGNRFWIRLRGCEFSKEAAAARWQQMIDRGVPNYFGTQRFGRDGGNVPQALRWFK
DEIQVRDRMLRGILLSAARSYLFNACVGHRVLDGTWDTPLSGDVFGFADNRSLVLPHNLH
GDETDRVRQGALELTAPLWGEGELQSQAAVKAMEEQVVAAYPDLLAGLAQFNLRQERRVM
RLRPLSAELTWESDSTLVLRFDLPKGTYATTLLRELVDIG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgatcgatcctccccgtctgcttggtccctcgttgggatcggtgatcttcaag
tcgcagccggaggactttgaggtcgaagaactgcttcgcttcgaaccatcgggcgaaggg
gaacattgtctggtttggttggagaagcggcatcgcaataccaacgatgtcgcgtcagaa
ctggcgaccaagctggggctgcgaaagcggttgatcagccactgcggcttgaaggacaaa
gaggcggtgacgcgacagtggtttagcctgcatctgcccggaaagccgtcgccgtcggcc
gaggatttgacggttgaaggagttcgcgtgttgcggatcgtgcgccacctgcgcaagctg
catcgcggcgcgcacgatggcaatcgcttttggatccgattgcgcggctgtgagttctcc
aaagaagctgccgccgcgcgatggcagcagatgatcgaccgtggcgttccgaactacttt
ggcacccagcgatttggccgcgacggtgggaacgtgcctcaggcgctgcgatggttcaag
gacgagatccaagtccgcgatcgcatgctgcgcgggatcctgttgtccgccgcccgcagc
tatctgttcaacgcctgtgtcggccatcgcgtgctcgacgggacatgggatacgccgctg
tcgggcgacgtgtttgggttcgccgataaccgcagcctcgtcctgccgcacaatctacat
ggcgatgaaaccgatcgcgtgcggcagggagctcttgagttaaccgcaccgctatggggc
gaaggggagctgcagagccaagccgcagtcaaagcgatggaagagcaagtcgtcgctgcc
tatcccgatctgttggccggtttggctcagttcaatctgcggcaagagcggcgtgtgatg
cggctgcgaccgctgtcggcggaactgacctgggagtccgattcgacgctcgtgctgcga
ttcgatcttcccaaaggaacctacgccacgacgctgctgcgcgagttggtcgatattggc
tag
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