Rosistilla carotiformis: Poly24_09100
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Entry
Poly24_09100 CDS
T09894
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03410
Base excision repair
rcf03430
Mismatch repair
rcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Poly24_09100 (recJ)
03430 Mismatch repair
Poly24_09100 (recJ)
03440 Homologous recombination
Poly24_09100 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_09100 (recJ)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Poly24_09100 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Poly24_09100 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Poly24_09100 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDV67217
UniProt:
A0A518JNU3
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All DBs
Position
1173165..1174916
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AA seq
583 aa
AA seq
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MAKRWRLLPHDMGRVEHLMRQSRLPAVVAQVLIRRGVFQSEDVQRFLESRLTMLRDPEDL
PGVPAAADQIHQAILDRKSIVIYGDYDADGITGTAILFNGLKLLGADVSYFVPNRLEDGY
GLNCDSLRKLATRGKQMVISVDCGIASPDEADLCKELGLELIVTDHHQFGERLPDATLVH
PRLPGSHYPFAGLCGAGVAFKLAWSVCQRACGAKKVTERLRSYLMQSLAVAAIGTVADVV
PMLDENRILVHHGLRSLLSNPSIGMRELLKMTKLDQKSALSSEDIAFMLAPRLNATGRLG
QAQLGVELLTTDNPVRAAALAEYIDGLNGSRQTLERSVYLAADKQAKDEFDPEQDPALVL
SGVDWHKGVIGVVAGRIAEKYGRPTIILSLDGAAGKPAVGSARSGGMVDLHAMLGECNEH
LITYGGHAAAAGVSLDESSLDRFREAFCEAVSQNVPSDYQAEINIDAEASFSQWNLETVK
QVEMLEPFGDSNPRPIFCASGVSLKEPARKMGGGDRHLTVNLVQHNSAMRAVAFGAGQWC
EELNALNAPIDVAYRPVINEFRGYRKVEIQIVDWRPAGQRVSD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggtggcgtctgctgcctcatgatatgggccgggttgagcatctcatgcgc
caatcccggttgcccgcggtggtcgcccaagtgctgatccgacgcggcgtgtttcagtcc
gaagacgttcagcggtttctcgagagccgcttgaccatgctgcgtgaccccgaggatcta
cccggggttccggccgctgccgaccagatccatcaagcgatcctcgatcgcaaatcgatt
gtgatctacggcgattacgacgccgatggaattaccggcacggcgatcctgttcaatggg
ttgaagttgcttggggcggacgtcagctatttcgtccccaatcggctggaggatggatac
gggctgaattgcgattccctgcggaaactggccacccgcggcaagcagatggtgatcagc
gtcgattgcgggatcgcaagccccgacgaagccgatctgtgcaaggagctgggcctggag
ctgatcgtcaccgatcaccatcagttcggtgagcgtttgcccgacgccacgctcgtccat
cctcggctgcctggcagccattatccattcgcaggactctgcggggcgggagtggctttc
aagttagcttggtcggtttgtcagcgggcctgcggcgccaagaaggttaccgagcggttg
cgttcgtatctgatgcagtcattggcggtcgcggcgatcggcaccgttgccgatgttgtt
ccgatgttggatgagaaccgaatcttagttcatcacgggctgcgaagcctgctgtcgaat
ccttcgatcgggatgcgcgagctgctgaagatgaccaagttggatcagaagtcggcgctt
tccagcgaggatatcgcttttatgctcgccccgcggctcaacgcgaccggccgtctgggg
caagctcagttgggcgtcgaactgctgaccaccgacaatcccgtccgcgccgccgccctg
gcagaatacatcgacgggctcaatggtagccggcagacgctggaacggagtgtctatctg
gcggcggataagcaagccaaggatgaattcgatcccgaacaggatcctgcattggtgctt
agcggagtcgattggcacaagggtgtgatcggtgtggttgccgggcggatcgcagagaag
tacggccggccgacgatcatcctgtcgcttgacggtgccgcgggcaagccagcggtgggc
tctgcccggtctggcggaatggtcgacttgcacgcgatgcttggagagtgcaacgagcat
ctgatcacttacggcgggcacgccgcagcggcgggcgtcagcttggatgaatcctcgctg
gatcgtttccgcgaagcgttctgcgaagcggtttcgcaaaacgtgccaagcgactatcag
gccgagatcaacatcgatgccgaagcgtcttttagccagtggaatctcgaaacggttaag
caggtcgagatgttggagccgtttggcgacagcaatccgcggccgatcttttgtgcttcg
ggggtctcgctgaaggagcccgctcggaagatggggggaggcgaccggcacctgaccgtc
aacctcgtgcagcacaacagtgcgatgcgagctgttgcgtttggagcgggtcagtggtgc
gaggagctgaacgcattgaacgctccgatcgacgttgcttatcgcccggtaatcaatgag
ttccggggctaccggaaggtcgagattcagatcgtcgattggcgacccgcgggccagcgc
gtttcggattga
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