Rosistilla carotiformis: Poly24_09990
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Entry
Poly24_09990 CDS
T09894
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Poly24_09990 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcf03019
]
Poly24_09990 (recQ_1)
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_09990 (recQ_1)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Poly24_09990 (recQ_1)
Messenger RNA biogenesis [BR:
rcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Poly24_09990 (recQ_1)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Poly24_09990 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
SKI
Motif
Other DBs
NCBI-ProteinID:
QDV67306
UniProt:
A0A518JP40
LinkDB
All DBs
Position
complement(1290288..1293278)
Genome browser
AA seq
996 aa
AA seq
DB search
MPSTLSPSDFLDRFGLTQFRSGQEAVIQQVLDGKDVLCVMPTGGGKSLCYQLPSVMLDGL
TIVVSPLIALMQDQVDVLQKKGFRATLINSSLKPAEQFDRMQAMAEGKYDLIYIAPERLR
NSRFLESVRKTKVSLLAVDEAHCISEWGHDFRPDYARLGQFRIRNLGGVQTIALTATATP
TVRDDIVKLLSLHEPKPFITGFARENLRFAVTPCGSDREKDQRLAEFLRGQKGIGIIYAA
TRKRCEEIALWLPGKLGKPVGIYHGGLDPQQRRSVQEDFMAGKLAAIVATNAFGMGIDKS
DIRYVVHYNMPGSLEAYYQEAGRAGRDGLPSECLLLFSYSDRYIQEFFIENNYPTRDVVA
AVYKFLHSRTDDPIEMTLDQIREKIGLQVGGEAIGTAERLLAKTGVLERLDSSANQAIIR
IDSTLPTLVDMLPREAKVRRRVLQAAEKIIGDRREEDVYFSLDRIVKSTDQSRESVTRTL
RELSRLRDFDYVPPFRGRAIHFRKRDVPFNDLKIDFVELERRKRAEYEKLDHVIRFAQTP
NCRQLAVLNYFGDPAADVCGNCDRCDLTQPRKNAAVTTAAAVPLTAEETEEQQLITQLVR
IVLSALARTHGRFGKGLVAQMLAGSQNKKLQQLKLDRLSTFGLLKGLKQAQVTDLLDAVC
SVGMAQQIEVTQRRPTVKLTDFGQEVMKGNQPVPVAFTIARPLKIKAMALVRKMAAAEEV
AETPAEKPKPTANPDLLKTLRKWRLEAANELGVPAYRIVSNATLEAIAAKQPQSVSELES
IRGIVPETVEQYGYALTQLITSQLSEADDLPDDDIDLDPSYDELSDDDDDVPQPPISGNE
ASVALDHGEPKPLANRDSGQPKDLLWDANAPTKSVSGGGAFGEAKPATPEEAPTRQVTGD
GDAFWTWKLLQDGYSADQCCEIRRIDQGTLLSHLIAAARDQRPVPLDWVAGEEAKLLATI
AAATDSAATLDGLIPSHWDPKLLQLARETRRPQGRG
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgacactttccccaagcgatttcctggaccggtttggcctgacccaattccgc
agcgggcaggaagcggtgattcaacaggtcctcgacggcaaggacgtgttgtgcgtgatg
ccaaccggcggcggcaaaagcctgtgctatcaattgcccagcgtgatgctcgacgggctg
acgatcgtcgtctcgccgctgatcgcgctgatgcaggaccaggtcgacgtgctgcaaaag
aaaggctttcgggcgacgctgatcaacagctcgctgaaaccggccgaacagttcgatcgc
atgcaagcgatggccgagggaaagtacgacctgatctacatcgcgccggagcggctgcgg
aacagccgctttttggagagcgttcgcaaaacgaaggtctcgctgctggcggtcgatgaa
gcccactgcatcagcgaatggggacatgatttccgccccgattacgctcgcctggggcag
ttccgaattcgcaacctgggcggcgtgcagacgatcgctctgacggccaccgccacgccg
acggttcgcgacgacatcgtcaagctgttgtcgctgcacgaaccaaagccattcatcacc
ggttttgctcgcgaaaacctgcggttcgcggtcactccctgcggcagcgatcgcgagaag
gatcaacggctggcggagttcctgcggggccagaaggggatcgggattatctatgccgcg
acgcggaaacgctgcgaagaaattgccctctggttgccggggaagctgggcaaaccggtc
gggatctatcatggcggcctcgatccgcaacagcggcggagcgtccaagaggacttcatg
gcggggaagttggccgcgatcgtggcgaccaacgcgtttgggatgggaatcgacaaatcg
gacatccgctacgtcgtccactacaacatgcccggcagcctagaagcctattaccaggaa
gcaggccgggccggccgggacggtttgcccagcgaatgcctgctgttgttcagttacagc
gaccgctacatccaagaatttttcatcgagaacaactacccgacccgcgacgtcgtcgcg
gcggtctacaagttcttgcactcccgcaccgacgacccgatcgaaatgacgctcgatcag
atccgcgagaagatcggcctacaagtcggcggcgaggcgatcgggaccgccgagcggttg
ctggccaaaacgggagtcctggagcggctggacagcagcgccaaccaggcgatcatccgg
atcgacagcacgctgccgaccttggtcgacatgctgccgcgggaagccaaagttcgccgc
cgcgtgttgcaagcggctgaaaagatcatcggcgatcgacgcgaagaggatgtctatttt
tcgctcgaccggattgtcaaatcgaccgatcaatcgcgtgaatcggtgacgcgaacgctg
cgtgaattgagccggttgcgagacttcgattacgtgccgccgtttcgcggccgggcgatc
cacttccgcaaacgcgatgtccccttcaacgacctgaagatcgatttcgtcgaactcgaa
cgccgcaagcgggccgaatacgagaagctggatcatgtgatccggtttgcgcaaacgccg
aactgccggcagttggcggtgctgaattatttcggcgatccagcagccgacgtctgcgga
aactgcgaccgatgcgacctgacgcagccccgaaaaaatgcggcggtgacaacggcggcc
gccgtcccgttgaccgctgaagagaccgaggaacagcagctgatcacccaactggtgcgg
atcgtgctcagcgccctggctcgcacccacgggcgatttggcaaagggctggtcgctcaa
atgctggccggttcccaaaacaagaagctgcaacaattgaagctcgatcgcttgagcacc
tttgggctgctgaagggactcaaacaagctcaagtcaccgatctgctggacgccgtctgc
agcgtcgggatggcgcaacagatcgaagtcacccagcggcgtccgacggttaagctgacc
gattttgggcaggaagtgatgaaggggaaccaaccggtaccggtcgcctttacgatcgcc
cggccgctgaaaatcaaagcgatggcattggtccgcaagatggccgcagcggaagaggtc
gccgagacgccggcggaaaagccgaaaccgacagcgaatcccgatcttctgaagacgctc
cgtaaatggcgactggaagcggccaacgaactgggcgttcccgcctaccggatcgtcagc
aacgcgaccctcgaagcgatcgccgccaaacagccgcagagcgttagcgaactggaatcg
attcgcggcatcgttcccgagacggtcgaacagtatggctacgcgttaacccagttgatc
acatcgcaactgtccgaagccgatgatctccccgacgacgatatcgacctcgatccgtcg
tacgacgagctatccgacgacgacgacgacgtcccacaaccaccgatatcaggaaacgaa
gcttcagtcgcactggatcacggcgaaccgaaaccgttggcaaaccgcgactccggccaa
ccgaaggatctattgtgggacgctaacgcccccacgaagtcggtcagcggcggcggcgcc
ttcggcgaagcaaagcctgccacgccggaggaagctccgacgcgtcaggtgacgggcgat
ggcgacgctttctggacttggaaactgctgcaggatggctactccgccgaccaatgttgc
gagattcggcggatcgaccaggggaccttattgtcgcacctgatcgccgccgcccgcgat
cagcgaccggttcccttggactgggtagccggtgaggaagcgaaattgctggccaccatc
gctgcggcgaccgattcagcggccactcttgacggcttgatccccagccactgggatccc
aagctattgcaattggctcgcgaaacgcgtcggccccaggggcgtggttag
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