Rosistilla carotiformis: Poly24_10980
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Entry
Poly24_10980 CDS
T09894
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Poly24_10980 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcf03019
]
Poly24_10980 (recQ_2)
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_10980 (recQ_2)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Poly24_10980 (recQ_2)
Messenger RNA biogenesis [BR:
rcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Poly24_10980 (recQ_2)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Poly24_10980 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SinI
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDV67403
UniProt:
A0A518JPE5
LinkDB
All DBs
Position
1424597..1426108
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AA seq
503 aa
AA seq
DB search
MHAQQLEAPATFLFFALLTLLNTPVSVLKKFFGYSEFRAKQAQIVDHVLSGQHALVIMPT
GMGKSLCFQIPALMLAAESRDAKTKRRPLTLVMSPLIALMKDQVDTLVRRDISATFVNSS
LDRKERNKRYKEIGEGKYDLLYVTPERFRKADFLEQLGRREIPLLAVDEAHCISQWGHDF
RPDYTRLEEIRQTLGNPITIALTATATPQVQADIVAQLGLQPHEARTFHEGIDRPNLSLK
VIDVWGEDEKLQQMLRIREEAEGSGIVYFTLIKTLEQFSDQLLSRGVPHLVYHGDLPRHE
RRRVQDEFMLQPDWMVLATNAFGMGIDKEDIRYVVHADVPGSMESYYQEIGRAGRDGLPS
ECTLLYEEADLATQMEFIGWSNPSAEYYRRVYDFLKHDAEQIQAYGIEWLRDQLTRKDKH
DHRLDTALSMLHRWGAIEGSLRPLKARVTGPMPPQLSDQDQLDEKLRRDQQKLYALVQYV
KHEGDRKDFLNEYFGVAESQTGA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgcacaacagttggaagcacctgctacattcctcttttttgctctgctgacgctc
ttgaatactcccgtttccgttctgaagaagttttttggttattcagagtttcgcgccaag
caggctcagattgtcgaccacgtgctgtccggtcagcatgcgttggtgatcatgccgacc
gggatgggcaaatcgctctgcttccagatcccggcgctcatgctggccgccgaatcacgg
gacgcaaagaccaagcggcggccgctgacattggtgatgtcccccttgatcgcgctgatg
aaagatcaagttgacacgttggtgcgacgcgatatctcggcgacgtttgttaattcgtcg
ttggatcgcaaggagcggaacaagcgttacaaggagatcggcgaggggaaatacgatctg
ctgtacgtgacgcccgaacgatttcgcaaagctgatttcttggagcaacttggccggcga
gagatcccgttgctggccgtcgacgaagcgcactgcatcagccaatgggggcacgacttc
cgtcccgactacacgcggttggaagagatccgccagacgctcggcaatccaataacgatc
gctttgaccgccacggcgactccgcaagtacaggccgatatcgtcgctcaacttggcctg
caaccgcacgaagcgcggacgttccacgagggaatcgatcgccccaacctttcgctgaag
gtgatcgatgtctggggcgaggacgagaagctgcaacagatgctgcggattcgcgaagaa
gccgaaggaagcgggatcgtctacttcacattgatcaagacgctggaacagttcagcgac
caactgctatcgcgcggcgttccgcatctggtctatcacggcgatctgccgcgtcacgag
cgtcgccgcgtgcaagatgaattcatgctgcagcccgattggatggtgttggcgaccaat
gcgtttggaatggggatcgacaaggaggacattcggtatgtggtccacgccgatgtgcct
ggatcgatggagtcgtattaccaagagatcgggcgagccggccgcgacggcctgccatcg
gaatgtacgcttctgtacgaggaagccgatctggcgacgcagatggagttcatcggttgg
agcaatccgtcggcggagtactatcgccgcgtctacgattttctaaagcacgatgcagaa
cagatccaggcttatggcatcgaatggctccgcgatcaactgacgcggaaagacaagcac
gaccatcggctggacactgcactgtcgatgttgcaccgctggggggcgatcgagggctcg
ctgcggccgctaaaagcccgcgtgaccggcccgatgccgccgcaattgtccgaccaggat
caactggacgaaaaattgcgtcgcgaccagcaaaaactgtacgcgttggtccaatacgtg
aagcacgaaggggaccgcaaagatttcttgaacgaatactttggggttgcagaatcccaa
acgggtgcctga
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