Rosistilla carotiformis: Poly24_16870
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Entry
Poly24_16870 CDS
T09894
Name
(GenBank) Cadherin domain protein
Organism
rcf
Rosistilla carotiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
He_PIG
Cadherin_CELSR2_9th
Dockerin_1
SdrD_B
CarboxypepD_reg
Big_9
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
QDV67981
UniProt:
A0A518JR06
LinkDB
All DBs
Position
complement(2184848..2188789)
Genome browser
AA seq
1313 aa
AA seq
DB search
MLNTRTKRRRGLRFEGLERRHLLAGVISEYSTAATNQFLELRGEPNAVLPAGTYVTVVES
TGNVLGGRIDTVLDLSGQRYGSNGFLVIALSDHSFTIDPEATALVSATTNLDGLPAGIYQ
GGDFSVFTATAFLIQSDIPPVSQDDIDTNADGIIDPAGAAASWTIHDSVTIGTIHDYFGY
GQTVIGKLSKQLSLQSDSTFVAIDEAVIDSVYYVGRLGDSSGRSADVWVAGFIHEDFRTQ
NSLRFYAGELSGYTPIPTVFSGRGIDHVGTYNFFGGVRGTAFNDVSRQPLPGLTVLADTN
GNGVRDVITTVIEPDNFVAGADMTNAIPGVTLTAAQRNSPYPAGTIAPRTNTVGLASTGT
SVFSRQGLSFFGDEGLRVEFYRDADSVQIDAIGTSSNFPALVRMEAFDRSGQSLGVVRSE
TLLRGQRQTLNFVSNRGEIALVTITEDFGNAHYVNYDRLVVSQKEATATTNALGQYEFQY
LTPGSYQITIPSASGVIPRQPVGGSQGVTIDFTEHFDVNFLFGDNKPPVIDVATLEMDVD
ENAPIGTVIGSIAATDPDTDQTVRYRLVDGTGRRYFALDPSSGEIRVSNPRGLNFELTRE
YTLVIDASDNFLPSASERATVTVAINNVNDPPALADNRFTVPENASDGYVVGTVIASDQD
AINEASDDPESPNGTIGEQSGEFRFAIADSMYDAMFAIDPVTGELSVTDAATFDFETIRE
FLLPIAVTDLALTPTTHTGTVRIQVLDVNEPPQMDNALITVGENVSPGIVLATPAVFDPE
GWESFTHTIIAGSGQALFTMDQDSGAIRLADGASLDFETRSSYDLVVRTVEVPNDLGQPA
NPLSSESTLSIQVGDIDEPPLVEFTATMIDENAPAGTVVATLTGIDPEGATLTIDQRTGE
SAFVFDASTNQLRVAAGATIDFENDASHSVLLRVSDASFPPNFTDVWIPIAIGNVNEPPA
ITTQNLSIYENAAAGTLGVQVVATDPDASDRLRFEIVGGDAADIFGIGEETGVLTLLPAA
TLDFEAIEGPLSLEVQVTDAGGLLDSKTVEITVLNVNESPVIEEPFANLRLSAGRHFCLA
FEDDLFSDPDANTEFEVSIASSSGVLPGWLSYDSATRKLLGTPKVTDVGTTSIVVRINDQ
EDLPLAASDAFLLSVASSDAGDFHTSNCGAAWQNPTNRFDVNNSGEVAPIDAVMILNFLN
RSGPQIVPAEDPIGRYLDVDGDNAILPIDALQVLNYINSTTSVLNRVAAQGEAADATATD
LALLDLTQVATEHAAAATAAAAVWSPSDAFADDEEDEDPAEAIDSSLREMLLS
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacacccggaccaaacgacgtcgtggattacgcttcgaaggactggagcgacgc
catttgttggcgggagtgatcagtgagtattcgaccgctgcaaccaatcaatttttggag
ctgcgtggcgagcccaacgcggtgcttcctgcgggcacctacgtgacggtggtcgaaagc
acgggaaacgtattaggaggccgtatcgatacggtactcgacctgtcggggcagcgttac
ggtagcaatggctttctcgtgatcgcgctgtcggaccattcgtttacgatcgatccagaa
gccactgcgttggtcagcgcgaccactaatctcgacggtttgcctgcgggaatctatcaa
gggggcgatttttccgttttcaccgctacggcgtttttgattcaatcggacattcctccg
gtgtcgcaggatgacatcgataccaacgccgatgggatcatcgatcccgcgggggcggcg
gcttcatggacgatccacgactcggttaccatcggaacgattcacgactactttggctat
ggccagaccgtgattgggaagctttcaaaacagttgtcgctgcaatcagattcgaccttt
gtcgcgatcgacgaggccgtgattgacagcgtgtattatgttggccggttgggagattcc
agcggtagatccgccgatgtgtgggttgcaggattcattcacgaggattttcgaacgcaa
aattcactgcgattttatgccggtgagctttccgggtacacgccgattcctacggtcttc
agcggacgggggatcgatcacgtgggaacctacaattttttcggcggtgtccggggaacc
gcttttaatgacgtctcccgtcaacctctgccgggactgacggtgctggctgacactaac
ggaaacggtgttcgcgatgtgattacgacggtgatcgaaccggacaattttgtcgccggg
gccgacatgaccaatgcgattcctggggtcacgttaactgctgcccaacgcaatagtccg
tatcccgcaggaaccattgccccacgcaccaataccgtgggacttgcgtcgactggcaca
agcgtgttttccaggcagggcctctcgttctttggcgatgaaggtttgcgggttgaattc
tatcgcgatgccgattcggttcaaatcgatgcgatcgggacatcgtcgaactttccggcc
ttggttcgaatggaggcatttgatcgcagcggccaatcgcttggcgtggtgcgatcggag
acgttgttgagggggcagaggcagacgctgaacttcgtatccaaccgcggtgagatcgcg
ttggtgacgattaccgaagactttggcaacgcccactacgtgaactacgatcgtttggtc
gtcagccagaaggaagcgaccgcgaccacgaacgccttggggcaatacgagttccaatac
ctaacgcctggttcctatcagatcaccattccgagcgcatcgggagtgatccccaggcag
cccgtcggtggttcccagggagtgacgatcgacttcaccgagcattttgatgtcaatttt
ctgtttggtgataacaagcccccggtgatcgatgtcgctacgttagaaatggatgtcgac
gaaaacgcaccgatcgggacggtgattggaagtattgccgcgaccgatcccgacaccgat
caaaccgtgcggtatcgattggtcgatgggaccggccgacgctatttcgcgctcgatccg
tcgagcggcgagattcgtgttagcaaccctcgcgggttgaatttcgaattgacccgggaa
tacaccctggtgatcgatgcctcggacaattttctcccgagtgcttcggaacgcgcgacc
gtcaccgtggcgattaacaacgtcaacgatccgccggcattggccgacaaccgatttacc
gtcccagaaaatgcttccgatggttacgtcgtcggtacggtcatcgcgagtgatcaggat
gcgattaacgaagcgagcgacgatcccgaatcgcccaatggaacgattggcgagcagagt
ggcgagttccggtttgcgatcgcagattccatgtacgacgcgatgtttgccatcgatccc
gtgaccggagagttgtcggtgaccgatgcggctacgttcgacttcgaaacgattcgggaa
ttccttctgccgatcgccgtgaccgacctcgctttgacgccaacgacccatacggggacc
gtgcgaattcaagtgctggatgtcaacgaaccgccccaaatggataatgctttgatcacc
gtcggtgaaaacgttagtcccggcatcgtgcttgcaacccccgcagtgtttgatcccgag
ggttgggaatcgttcacacacacgatcatcgcgggcagtggtcaagctttgtttacgatg
gaccaggacagtggagcgatccggttggccgatggggcttctttggacttcgaaacccga
tcctcgtacgacctcgttgttcgcacggtcgaagttcccaacgaccttggccaaccggcc
aacccgctgagttccgagtcgacgctgtcgattcaagtgggagatatcgatgagcccccg
ctggttgaattcacggcgacgatgatcgatgaaaacgcacccgccgggacggtcgtggcg
accttgaccggcatcgatcccgaaggcgctacgctcacgatcgatcaacgcactggagag
tcagcgtttgtgttcgatgcaagcacgaatcaattgagagtcgccgcgggcgcaaccatt
gattttgagaacgatgcatcgcattcggtcctcttgcgagtctccgacgcttcctttcca
ccgaatttcaccgacgtgtggatccctatcgccatcggtaacgtcaacgaaccgccagcg
atcacaacgcaaaatctatcgatctacgagaatgccgcggccgggacgctgggcgttcag
gtggttgccaccgatccggatgccagcgatcggctccgttttgaaatcgttggaggggac
gccgcggacatttttggaatcggagaggagacgggtgtgctgacgctgttgcccgccgca
acgctcgatttcgaagcgatcgaagggcccttatcgcttgaggttcaagtcaccgatgct
ggcgggcttctcgattcaaagacggttgaaatcactgttctgaacgtcaacgaatcgcca
gtgatcgaggagccctttgcaaatctacggctctccgcgggacgccatttttgccttgcc
ttcgaagacgatctattctccgatccggatgccaacaccgaattcgaagtttcgattgcg
tccagcagcggcgttttgcccggttggttgagttacgatagcgcaacgcgcaagttgctg
ggcacccccaaagtcaccgatgttggaaccacgtcgatcgtcgtaaggatcaatgatcaa
gaggacttgcccttggcggcgtccgacgcattcctcctttcggtcgccagttccgacgcc
ggtgatttccacacctccaactgtggcgccgcgtggcagaacccgaccaaccgcttcgac
gtcaacaatagcggtgaggtcgctccgatcgacgccgtgatgatcctcaactttctgaac
cgatccgggccccagatcgtgccagcggaggatcccattggacgctatctcgatgtcgat
ggcgacaatgcgatcttgccgatcgatgcgctgcaggtgttgaactacataaattcaacg
acgtcggttctgaatcgcgtggcggctcagggggaagctgccgatgcgaccgccaccgat
ctggccctgctcgatttgacacaggtcgccaccgaacacgccgctgctgccacggccgct
gccgccgtgtggtcgcccagtgatgctttcgcagacgacgaagaagacgaggatcctgct
gaggccatcgattcttcgctgcgggagatgttgttgtcctag
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