Rosistilla carotiformis: Poly24_19950
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Entry
Poly24_19950 CDS
T09894
Symbol
sigA_4
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
rcf
Rosistilla carotiformis
Pathway
rcf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Poly24_19950 (sigA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcf03021
]
Poly24_19950 (sigA_4)
Transcription machinery [BR:
rcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Poly24_19950 (sigA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QDV68286
UniProt:
A0A518JRY3
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All DBs
Position
2597345..2598970
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AA seq
541 aa
AA seq
DB search
MEVMEKELVDLIAKGKSQGYLTYEEVNNYLPDEDASPEKLDNLLLAIEDQGIELVDESLA
GGLLAKGKLSEVDAFVPSSELPKASDDPIRMYLSQMAEIPLLTRDEEIALAKKIEVTRRQ
FRRAILESDFALRATVETLRNVHEGKLPFDRTIKVSLTERLTKEQVSARMPHNLRTVGIL
MDQNKQDFDVIVRKSSSDEDRATARCSFIRRRRKCLQLVEELSLRSRRVTPLMKQLENFS
SRMDYIKQRMTQLGNDALSRDEDADLRQELRELIRVTQESPTSLRNRVAKFRKHFEAYEK
VKRELSSGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKYEYRRGFKFSTYATWW
IRQAITRAIADQARTIRIPVHMIDVLSKLRQVQKRMLQELRREPTMEEIALETEIPVEEV
RRVMDIGRHPVSLDRPVGEGEDSSFGEFIEDNESDNPVRCASNGILRQKIEDLLKTLTYR
EREIIKLRYGLVDGYSYTLEEVGRIFKVTRERVRQIEAKAVRKLQSPNRADHLEGFLKSE
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatggagaaggaactcgttgatctgatcgcaaagggaaagtcccagggttat
ctgacttacgaagaggtcaataactatcttcccgacgaggatgcaagtccagaaaaactc
gacaacctattgctggctatcgaagaccaaggaattgaactggtcgacgaatcgttagct
ggcggattgttagccaagggaaaactttcggaagtcgatgcgtttgtcccctcttccgaa
ctgcccaaagccagcgacgatccgattcggatgtatctgagccagatggcagagatcccg
ttgctgacccgcgacgaagagatcgcgttggccaaaaagatcgaagtcacccgtcgccag
tttcgtcgtgcgatcttggaatctgactttgctttgcgagccaccgtggaaacgcttcgc
aacgttcacgaaggcaaactgcccttcgaccgcaccatcaaggtctcgctgaccgagcga
ttgaccaaggagcaggtgagtgctcggatgccgcacaatttgcgaaccgttggcatcttg
atggaccaaaacaaacaagatttcgatgtgatcgtgcggaagagcagcagcgacgaagat
cgtgccaccgcgcgatgcagcttcatccgccgacgccgtaagtgcctgcaactggttgag
gaactgagccttcgcagccgccgagttaccccgctgatgaaacagctggaaaatttctcg
tcgcggatggattacatcaagcaacgcatgacccaactgggcaacgacgcgttgtcgcgt
gacgaggacgccgacctgcgtcaggaattgcgcgaactgattcgcgtcactcaagagagc
ccaacttcgctgcgaaatcgtgtcgccaagttccgcaaacatttcgaagcctacgaaaaa
gtgaaacgcgagctgtccagcggcaacctgcgactggtcgtttcgatcgccaagaagtac
cgcaaccgtgggctcagtttcctcgacttgatccaagagggaaacaccggcttgatgcgt
gcggttgacaagtacgaataccgacgcggatttaagttcagcacgtacgcgacgtggtgg
atccggcaagcgatcacgcgtgccatcgccgaccaagcacggacgatccggatcccggtc
cacatgatcgatgtgctcagtaaactgcgacaagttcaaaagcggatgctgcaagaattg
cgtcgcgaaccgacgatggaagagatcgcactggagaccgagatccccgtcgaagaggtc
cgccgtgtgatggacatcggccgccatcccgtcagcctcgaccgccccgtcggcgaaggg
gaagacagcagcttcggtgaattcatcgaggacaacgagagcgacaacccggtccgatgt
gccagcaacggaatcctgcgtcagaagatcgaagacctgctgaagacgttgacctatcgc
gaacgcgagatcatcaaactgcgttacggcctagtcgatggctacagctacactctcgaa
gaagttgggcggatctttaaggtaactcgcgaacgcgttcgacaaatcgaagcaaaagct
gtcagaaaattgcaaagccccaaccgcgccgaccacttggaggggttcctgaaaagcgag
gtgtaa
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