Rosistilla carotiformis: Poly24_21560
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Entry
Poly24_21560 CDS
T09894
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf00061
Fatty acid biosynthesis
rcf00071
Fatty acid degradation
rcf01100
Metabolic pathways
rcf01212
Fatty acid metabolism
rcf02024
Quorum sensing
rcf04146
Peroxisome
Module
rcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Poly24_21560 (lcfB_1)
00071 Fatty acid degradation
Poly24_21560 (lcfB_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Poly24_21560 (lcfB_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Poly24_21560 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcf01004
]
Poly24_21560 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcf04147
]
Poly24_21560 (lcfB_1)
Enzymes [BR:
rcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Poly24_21560 (lcfB_1)
Lipid biosynthesis proteins [BR:
rcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Poly24_21560 (lcfB_1)
Exosome [BR:
rcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
Poly24_21560 (lcfB_1)
Exosomal proteins of breast cancer cells
Poly24_21560 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QDV68447
UniProt:
A0A518JSE5
LinkDB
All DBs
Position
complement(2823108..2824667)
Genome browser
AA seq
519 aa
AA seq
DB search
MSLIEQLLANAVQHGDALAWIDPLDRHTAQSFNWSDIGSQTLQAAERLAAKGVSPGHHVA
IVCDNSRQLAVLLGALRLVGFFRDQAQPPQSAVDIVIDVRLPDSHVAALIQHCDAQFLLL
GAGHRDRPLALPNGCQALAIDAICSAAAALPEDSTRLQRAVNWASGLEPTQPEAIMYTSG
TTADPKGVVLTHGNLASNAAGKLAAVPQTPDDRRLTLLPISHAYARTCDLGTWILSRSVL
AAASGYEGLLQSAIAVRPTLINLVPHLAEKIAHQARSAASPQQGLASLGLDRLRMLGCGG
AAMPSATFKDFTDWGITVIQGYGLTESSPVICSATPQDAAPGVVGRPVAGVEIKLDPQGQ
ILCRGTGLAKTYYKQDAAMAARMVDGWLQTGDLGHLDDNGCLQVLGRIDDMIVLSTGRKV
MPAAIETRICQMPGITHALVSGQDQPVLTAWIATEGAPITAADTERWQAKIADQLNDLPA
HAIPRIVRGIEVPLAVESGTLTAKGTVRRRLLISQLEHA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgattgagcaactgttagccaatgctgtccaacacggcgacgctttggcttgg
atcgatccgctcgatcgtcacacggcccaatcgttcaattggtccgacatcggttcgcaa
accctccaggccgccgaacgtttggcggccaagggcgtctcgcccggacatcatgtcgcg
atcgtctgcgacaacagtcgccaattggcggtcctgctgggagcactgcggttggtcgga
tttttccgtgaccaggctcaaccgccgcaaagcgccgtcgatatcgtcatcgatgtgcga
ttgcccgattcccacgtcgcggcgttgatccagcactgcgacgcacagtttctgctgctt
ggcgcggggcatcgcgatcgccctctcgcgctccctaacggttgccaagcgttggccatc
gatgcgatttgttccgcggcggccgcgctccccgaggacagcacccgtttgcaacgggca
gtgaactgggcatcaggtttggagccgacgcagcccgaagcgatcatgtatacgtcggga
accaccgccgatcccaaaggcgtcgtcttaacgcacggcaaccttgcctccaacgccgcg
ggaaaactggccgccgtgccgcaaacgcccgatgatcggcggctgacgttgctgccgatc
tcccatgcctacgcgcgaacgtgcgacctggggacatggattctcagccgcagtgtcctg
gcggccgccagcggatacgaaggactgctgcaatcggcgatcgccgtcagaccaaccctc
ataaaccttgttccccatctcgccgaaaagatcgcccatcaggcgcggtccgccgcaagc
ccgcagcaaggactggccagcttgggactcgatcggctgcggatgttgggttgtggtggc
gccgcgatgccctccgcgactttcaaagactttaccgattggggcatcaccgtgattcag
ggttatgggttgaccgaatcctcccccgtgatctgctccgccactccccaagacgctgcc
cccggcgtggtcggtcggccggtcgcaggcgtggaaatcaagctcgatcctcagggacaa
atcctttgccgcggtacgggcctcgcaaaaacctattacaagcaagatgcggcaatggcc
gcgcggatggtcgatggctggctgcaaaccggcgacctggggcacctcgacgacaacgga
tgtttgcaggtgctaggtcggatcgacgacatgatcgtgctgagcaccggccgcaaagtg
atgccggcggcgatcgaaacgcggatctgccagatgccggggatcacccacgccctggtc
tccggacaggatcaaccggtcctcaccgcgtggatcgccaccgaaggcgccccaataacc
gccgccgacacggaacgctggcaagcaaaaatcgccgaccagttgaacgatctgccggcg
cacgcgatccctaggatcgtgcgtggcatcgaggttccgctggccgttgaatcgggaacg
ttgaccgccaagggaaccgttcgtcgtcgcttgctgatctctcagttggaacacgcgtaa
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